Jatropha Genome Database

JcCB0335551.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0335551.10 - phase: 1 /partial
         (680 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c02639                                                            505   e-143

>KJC_c02639 
          Length = 760

 Score =  505 bits (255), Expect = e-143
 Identities = 290/295 (98%), Gaps = 5/295 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgaacttgacagctcctgctactccttacttctttaataccctgtatgacccttatcgtg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 tgaacttgacagctcctgctactccttacttctttaataccctgtatgacccttatcgtg 526

                                                                       
Query: 61  agggagcagattttgttcgtggatacccatttagtcttcgaaatggggtcgcatgtgctt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 agggagcagattttgttcgtggatacccatttagtcttcgaaatggggtcgcatgtgctt 586

                                                                       
Query: 121 tgtcatgtggactctggcttaatttagccgactttgatgctcctacgcaagctctgaagc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 tgtcatgtggactctggcttaatttagccgactttgatgctcctacgcaagctctgaagc 646

                                                                       
Query: 181 ctggacagagaaactctcgatatgttgatgcagtgatgactgttcctgctagggccatga 240
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 647 ctggacagagaaactctcgatatgttgatgcagtgatga-tgttcctgctagggccatga 705

                                                                  
Query: 241 tgcccattagt-ggaatcaacattg-cttttga-tcgcgagc-tggtgggccctg 291
           ||||||||||| ||||||||||||| ||||||| |||||||| ||||||||||||
Sbjct: 706 tgcccattagtaggaatcaacattgtcttttgattcgcgagcgtggtgggccctg 760