Jatropha Genome Database

JcCB0334901.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0334901.20 - phase: 1 /partial
         (221 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c00458                                                            438   e-123

>KJC_c00458 
          Length = 1290

 Score =  438 bits (221), Expect = e-123
 Identities = 221/221 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1    cagctgcacctttgccaggcctctctgctactgaccttctgacatatgagcggcaactag 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1006 cagctgcacctttgccaggcctctctgctactgaccttctgacatatgagcggcaactag 1065

                                                                        
Query: 61   caatgggcaagatgggtggtgtccatgctttgatgcaccctcaggggcagcatgctctta 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1066 caatgggcaagatgggtggtgtccatgctttgatgcaccctcaggggcagcatgctctta 1125

                                                                        
Query: 121  aacaagcagcaatgggtatgggtgctgctggagcaagccaggcaatatatgatggtgggt 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1126 aacaagcagcaatgggtatgggtgctgctggagcaagccaggcaatatatgatggtgggt 1185

                                                     
Query: 181  tccagagtgtagctgctgcccagcaactcatgtactaccag 221
            |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1186 tccagagtgtagctgctgcccagcaactcatgtactaccag 1226