Jatropha Genome Database
- JcCB0333201.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0333201.10 - phase: 2 /partial
(1360 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c00953 2674 0.0
KJC_c05389 84 1e-15
KJC_c04398 64 1e-09
KJC_c06278 60 1e-08
KJC_c06431 52 4e-06
KJC_c01049 52 4e-06
>KJC_c00953
Length = 3088
Score = 2674 bits (1349), Expect = 0.0
Identities = 1359/1361 (99%), Gaps = 1/1361 (0%)
Strand = Plus / Minus
Query: 1 ttcaaagacccagaaagcaattatagctggtggtgtaagtggtggagcagttatagctct 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1484 ttcaaagagccagaaagcaattatagctggtggtgtaagtggtggagcagttatagctct 1425
Query: 61 tgttgtaggtttctgtgttgttgctgcatctcgtcgtcgtagacatgggaaggaagcaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1424 tgttgtaggtttctgtgttgttgctgcatctcgtcgtcgtagacatgggaaggaagcaag 1365
Query: 121 ttcaagtgatggtccatctggatggctcccactttccctatatggaaattctcactctgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1364 ttcaagtgatggtccatctggatggctcccactttccctatatggaaattctcactctgc 1305
Query: 181 tggctcggccaagacaaacacaacagggagttatacttcttctctaccttctaacctttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1304 tggctcggccaagacaaacacaacagggagttatacttcttctctaccttctaacctttg 1245
Query: 241 ccgccacttctcatttgctgagatcaagagcgctaccaacaattttgatgaggctctgct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1244 ccgccacttctcatttgctgagatcaagagcgctaccaacaattttgatgaggctctgct 1185
Query: 301 ccttggagttggaggttttggcaaagtctacaagggagaaattgatggcggaacaactaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1184 ccttggagttggaggttttggcaaagtctacaagggagaaattgatggcggaacaactaa 1125
Query: 361 agttgcaatcaagcgtggtaatccactttctgagcagggtgtgcatgagttccagactga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1124 agttgcaatcaagcgtggtaatccactttctgagcagggtgtgcatgagttccagactga 1065
Query: 421 gattgaaatgctttcaaaactccgacaccgtcaccttgtgtccttaattggttattgcga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1064 gattgaaatgctttcaaaactccgacaccgtcaccttgtgtccttaattggttattgcga 1005
Query: 481 agagaactgtgagatgatccttgtttatgattacatggctcatggaacactacgtgagca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1004 agagaactgtgagatgatccttgtttatgattacatggctcatggaacactacgtgagca 945
Query: 541 tctata-caaaacccaaaagccccctctgccatggaagcaaaggcttgaaatatgtattg 599
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 944 tctataacaaaacccaaaagccccctctgccatggaagcaaaggcttgaaatatgtattg 885
Query: 600 gcgctgcacgtggtttacactatctccataccggtgccaaacacactatcatccaccgag 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 884 gcgctgcacgtggtttacactatctccataccggtgccaaacacactatcatccaccgag 825
Query: 660 atgtaaagacaactaacattcttttggatgagaaatgggttgcgaaggtttctgattttg 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 824 atgtaaagacaactaacattcttttggatgagaaatgggttgcgaaggtttctgattttg 765
Query: 720 gcttgtctaagacaggccctacattggatcacacccatgttagcactgtagtaaagggta 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 764 gcttgtctaagacaggccctacattggatcacacccatgttagcactgtagtaaagggta 705
Query: 780 gttttggttatttggatccagagtacttcaggcggcagcaactaactgaaaaatctgatg 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 gttttggttatttggatccagagtacttcaggcggcagcaactaactgaaaaatctgatg 645
Query: 840 tttactcatttggtgttgtgctgtttgagattctatgtgcacgaccggcattgaatccaa 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 tttactcatttggtgttgtgctgtttgagattctatgtgcacgaccggcattgaatccaa 585
Query: 900 cactggcaaaggagcaagtaagcttggcggaatgggctgcccattgtcacaagaaaggca 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 cactggcaaaggagcaagtaagcttggcggaatgggctgcccattgtcacaagaaaggca 525
Query: 960 tccttgatcagattcttgacccttatctaaaggggaagattgcacccgaatgtttcaaaa 1019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 tccttgatcagattcttgacccttatctaaaggggaagattgcacccgaatgtttcaaaa 465
Query: 1020 agtttgctgagacagcaatgaagtgtgtgtctgatcagggaattgagaggccatcaatgg 1079
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 agtttgctgagacagcaatgaagtgtgtgtctgatcagggaattgagaggccatcaatgg 405
Query: 1080 gtgatgtgctttggaacctagagtttgctttgcaactacaagagagtgcagaggagagtg 1139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 gtgatgtgctttggaacctagagtttgctttgcaactacaagagagtgcagaggagagtg 345
Query: 1140 gcaagggtattggcggagcagatggagaggaggtggcattcaatgctgcctctaaaggga 1199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 gcaagggtattggcggagcagatggagaggaggtggcattcaatgctgcctctaaaggga 285
Query: 1200 agaaagatcctgatgcttcctctggatttgatggcaatattacagactcaagaagcaccg 1259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 agaaagatcctgatgcttcctctggatttgatggcaatattacagactcaagaagcaccg 225
Query: 1260 gaatgagcatgagcataggcggccggagtcttgctagtgaagattctgatgggcttacac 1319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 gaatgagcatgagcataggcggccggagtcttgctagtgaagattctgatgggcttacac 165
Query: 1320 caagtgcagttttttcacagatcatgaatcccaaaggtcgc 1360
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 caagtgcagttttttcacagatcatgaatcccaaaggtcgc 124
>KJC_c05389
Length = 888
Score = 83.8 bits (42), Expect = 1e-15
Identities = 195/246 (79%)
Strand = Plus / Plus
Query: 490 tgagatgatccttgtttatgattacatggctcatggaacactacgtgagcatctatacaa 549
||||||||||||||| || || |||||| | ||||| | || | || ||||||||||
Sbjct: 104 tgagatgatccttgtatacgagtacatgccgcatgggagccttcaagatcatctatacag 163
Query: 550 aacccaaaagccccctctgccatggaagcaaaggcttgaaatatgtattggcgctgcacg 609
||| | || || ||||| |||||||||||||| || |||||||||| || ||||||
Sbjct: 164 aacaaataatcctcctctcccatggaagcaaagactacaaatatgtataggagctgcaaa 223
Query: 610 tggtttacactatctccataccggtgccaaacacactatcatccaccgagatgtaaagac 669
|| ||||| ||||| ||||| |||| |||||||| ||||||||||| ||||| ||| |
Sbjct: 224 agggttacattatcttcatacaggtgtaaaacacaccatcatccaccgtgatgtgaagtc 283
Query: 670 aactaacattcttttggatgagaaatgggttgcgaaggtttctgattttggcttgtctaa 729
| | ||||| || |||| ||| ||||| || |||||||| |||||||||||||| ||
Sbjct: 284 atcaaacatactattgggcaggaattgggtggccaaggtttcagattttggcttgtcaaa 343
Query: 730 gacagg 735
|||||
Sbjct: 344 aacagg 349
>KJC_c04398
Length = 515
Score = 63.9 bits (32), Expect = 1e-09
Identities = 83/100 (83%)
Strand = Plus / Plus
Query: 759 ttagcactgtagtaaagggtagttttggttatttggatccagagtacttcaggcggcagc 818
|||| |||||||| || || |||||||| ||||| ||||| || || ||| ||| ||||
Sbjct: 124 ttagtactgtagtgaaaggaagttttggatatttagatcctgaatatttccggcttcagc 183
Query: 819 aactaactgaaaaatctgatgtttactcatttggtgttgt 858
| |||| |||||||||||||| || ||||||||||||||
Sbjct: 184 gattaacagaaaaatctgatgtatattcatttggtgttgt 223
>KJC_c06278
Length = 512
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 656 cgagatgtaaagacaactaacattcttttggatgagaa 693
|||||||| |||||||| ||||||||||||||||||||
Sbjct: 278 cgagatgtcaagacaacgaacattcttttggatgagaa 315
Score = 58.0 bits (29), Expect = 6e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 570 catggaagcaaaggcttgaaatatgtattggcgctgc 606
||||||||||| ||||||||||||||||||| |||||
Sbjct: 192 catggaagcaacggcttgaaatatgtattggtgctgc 228
>KJC_c06431
Length = 432
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 824 actgaaaaatctgatgtttactcatttggtgttgtgct 861
|||||||||||||||||||| || ||||| ||||||||
Sbjct: 257 actgaaaaatctgatgtttattcttttggggttgtgct 220
>KJC_c01049
Length = 1475
Score = 52.0 bits (26), Expect = 4e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 533 cgtgagcatctatacaaaacccaaaagccccctctgccatggaagcaaag 582
||||| ||||| ||||||||| |||| || ||||| ||||||||||||||
Sbjct: 95 cgtgatcatctctacaaaaccaaaaaccctcctcttccatggaagcaaag 46