Jatropha Genome Database

JcCB0329631.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0329631.10 + phase: 2 /pseudo/partial
         (748 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c10232                                                            254   3e-67

>KJC_c10232 
          Length = 494

 Score =  254 bits (128), Expect = 3e-67
 Identities = 149/152 (98%), Gaps = 3/152 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttgcaagagaaatggaaaagattgagaaaaattctcttggggagtcaaatccttaaaggt 60
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 346 ttgcaagagaaatggaaaagattgagaaaaattctcttggg-agtcaaatccttaaaggt 404

                                                                       
Query: 61  tatctaatggctacccttttttatgagccatctactcgtactaggctttcttttgagtct 120
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 405 tatctaatggctacccttttttatgagccatctactcgtactaggctttc-tttgagtct 463

                                           
Query: 121 gctatgaaaaggttaggcggtgaggttttaac 152
           |||||| |||||||||||||||||||||||||
Sbjct: 464 gctatg-aaaggttaggcggtgaggttttaac 494