Jatropha Genome Database

JcCB0321931.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0321931.10 - phase: 0 /partial
         (579 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c08403                                                            490   e-138

>KJC_c08403 
          Length = 643

 Score =  490 bits (247), Expect = e-138
 Identities = 261/263 (99%), Gaps = 2/263 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   cgaccaggaagaaaaggcccgccattaacctgggtacagaggctcaaaataggagttgat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 cgaccaggaagaaaaggcccgccattaacctgggtacagaggctcaaaataggagttgat 441

                                                                       
Query: 61  attgcacgtggcctgaactatctccattttgaccgtgctgttccacatggtaaccttaaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 attgcacgtggcctgaactatctccattttgaccgtgctgttccacatggtaaccttaaa 501

                                                                       
Query: 121 gcatcaaacatactgctagatggacctgatctcaatgcacgcattgctgattactgcctt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 gcatcaaacatactgctagatggacctgatctcaatgcacgcattgctgattactgcctt 561

                                                                       
Query: 181 cacagactaatgactcaagcaggcaccattgaacagatacttgatgctggagtc-ttagg 239
           |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||
Sbjct: 562 cacagactaatgactcaagcaggcaccattgaacagatac-tgatgctggagtcgttagg 620

                                  
Query: 240 ttatcgtgcaccggagttggctg 262
           |||||||||||||||||||||||
Sbjct: 621 ttatcgtgcaccggagttggctg 643