Jatropha Genome Database

JcCB0317061.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0317061.10 - phase: 0 /partial
         (576 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c04328                                                            932   0.0  

>KJC_c04328 
          Length = 1026

 Score =  932 bits (470), Expect = 0.0
 Identities = 477/478 (99%), Gaps = 1/478 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttgattttggaacttggtccttatattgaggagctgaagaaaacaggaggcgctattaag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 ttgattttggaacttggtccttatattgaggagctgaagaaaacaggaggcgctattaag 420

                                                                       
Query: 61  gagtttgttaacccaaaatacaaagatgccagcaaaacttcatttaaatcttcaactcga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 gagtttgttaacccaaaatacaaagatgccagcaaaacttcatttaaatcttcaactcga 360

                                                                       
Query: 121 cttgaatgtatgatgcaagattatccaaaaacattgcccccatcagcaagggtcggattt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 cttgaatgtatgatgcaagattatccaaaaacattgcccccatcagcaagggtcggattt 300

                                                                       
Query: 181 acggtgatggatacgtggcttgcttatgcacctgtgaagaacaatcctgaggatgctgct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 acggtgatggatacgtggcttgcttatgcacctgtgaagaacaatcctgaggatgctgct 240

                                                                       
Query: 241 aaggtaccaaaaggaaatccatatcacagtgcaacttctggagaaatggccatctatcgt 300
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 aaggtaccaaaagg-aatccatatcacagtgcaacttctggagaaatggccatctatcgt 181

                                                                       
Query: 301 gcaaacagcctcattctcagaaaggttggggtacaagtaggtgatccagttcaacaagtg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 gcaaacagcctcattctcagaaaggttggggtacaagtaggtgatccagttcaacaagtg 121

                                                                       
Query: 361 tttaatgggcaggaggtggaagtatggcctcgtatcacatggaaaccaaaatggggattg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 tttaatgggcaggaggtggaagtatggcctcgtatcacatggaaaccaaaatggggattg 61

                                                                     
Query: 421 acattttcagatgtcaaaagaaaagtttctggtagttgctcaatctctcaaaggtcca 478
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60  acattttcagatgtcaaaagaaaagtttctggtagttgctcaatctctcaaaggtcca 3