Jatropha Genome Database

JcCB0302981.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0302981.20 + phase: 0 /partial
         (536 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c10175                                                           1025   0.0  

>KJC_c10175 
          Length = 659

 Score = 1025 bits (517), Expect = 0.0
 Identities = 520/521 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgggaagtacctttctttctcctccattgaaacgaacaattcattattctacaatcact 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 atgggaagtacctttctttctcctccattgaaacgaacaattcattattctacaatcact 462

                                                                       
Query: 61  gccggtatgcctgacccgaactctattaacggaacctccaacaaacgttccaaacctctt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 gccggtatgcctgacccgaactctattaacggaacctccaacaaacgttccaaacctctt 402

                                                                       
Query: 121 gctccttctcctttgcctgtcccacctggacacgtgtctttccgcctcctctgccacgct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 gctccttctcctttgcctgtcccacctggacacgtgtctttccgcctcctctgccacgct 342

                                                                       
Query: 181 tctcgcattggcggcgttatcggtaagtctggtagtataatcaagcagcttcagcaagac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 tctcgcattggcggcgttatcggtaagtctggtagtataatcaagcagcttcagcaagac 282

                                                                       
Query: 241 actggtgccaagatccgtattgaggaggctccggttgagtcacctgaccgggttattacc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 actggtgccaagatccgtattgaggaggctccggttgagtcacctgaccgggttattacc 222

                                                                       
Query: 301 gttattgcttcgagtactgttgtttcgaaagtggcagtttcgaatgatggtagtggtagg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 gttattgcttcgagtactgttgtttcgaaagtggcagtttcgaatgatggtagtggtagg 162

                                                                       
Query: 361 caggaaattgatgtgtccaaagcgcaggaggctttggttagggtttttgagaggattttg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 caggaaattgatgtgtccaaagcgcaggaggctttggttagggtttttgagaggattttg 102

                                                                       
Query: 421 actgtggcggcggagagtgatgggattggtgttgctggaggggtggtttcgtgtagattg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101 actgtggcggcggagagtgatgggattggtgttgctggaggggtggtttcgtgtagattg 42

                                                    
Query: 481 ctgggggaggctaagcaggttgggtcggttattgggaaaag 521
           |||| ||||||||||||||||||||||||||||||||||||
Sbjct: 41  ctggcggaggctaagcaggttgggtcggttattgggaaaag 1