Jatropha Genome Database
- JcCB0299251.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0299251.10 + phase: 0
(819 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c00500 192 9e-49
KJC_s15897 139 1e-32
KJC_c00186 74 6e-13
>KJC_c00500
Length = 1361
Score = 192 bits (97), Expect = 9e-49
Identities = 427/537 (79%)
Strand = Plus / Minus
Query: 250 aaaactgcagcagctcctcttgaacgtgtaaaactcctaattcaaaatcaaaatgagatg 309
|||||||| |||||||| |||| ||||| || ||| | ||||||||||| ||||||||
Sbjct: 950 aaaactgctgcagctccaattgagcgtgttaagctcttgattcaaaatcaggatgagatg 891
Query: 310 atcaaagctggtcggctctccgaaccctacaaaggcattggagattgttttagcagaaca 369
|| ||| |||| | ||||| ||||| ||||| || ||||| ||||| |||| ||||||
Sbjct: 890 attaaaagtggtagactctcagaaccatacaagggtattggtgattgctttaagagaaca 831
Query: 370 attaaagatgagggctttctatctctctggagaggcaacgtaaccaatgtcattcgatat 429
||||| || || || ||| || | ||||| || ||| ||||||| || || ||
Sbjct: 830 attaaggaagaaggatttggttcattatggaggggtaacactgccaatgttatccgttac 771
Query: 430 tttcctactcaagcctttaattttgcattcaaagattactttaaaagacttttcaacttt 489
|| |||||||| ||||| || |||||||||||||||||||| || || || ||||||||
Sbjct: 770 ttccctactcaggccttgaactttgcattcaaagattacttcaagaggctcttcaacttc 711
Query: 490 aagaaggaccgcgacggttactggaagtggtttgctggtaacttagcttctggtggcgct 549
||||| ||| | || || |||||||||||||||||||| |||||||| |||||||| |||
Sbjct: 710 aagaaagacagggatgggtactggaagtggtttgctggaaacttagcatctggtggtgct 651
Query: 550 gctggtgcttcttcccttttgtttaactattctttggattatgctagaactcgtcttaca 609
||||||||||||||||| | ||| ||| || |||| |||||| |||| |||||| |
Sbjct: 650 gctggtgcttcttccctcctctttgtctactccctggactatgctcgaacccgtcttgct 591
Query: 610 aatgatgcaaaatctgtaaaagcaggaggacagcgccaattcaatggtttgattgatgtc 669
|||||||| || ||| || ||||| || | |||||||||||| | |||||||||
Sbjct: 590 aatgatgccaaggctgccaagaagggaggcgagagacaattcaatggtctcattgatgtc 531
Query: 670 tacagaaagactctaaaatcagacggtattgttggactttaccgtggatttaacatttcc 729
||||| ||||| | ||| || ||||||| ||| ||||||||||| |||||||||||
Sbjct: 530 tacaggaagacattggcatctgatggtattgctgggctttaccgtgggtttaacatttct 471
Query: 730 tgtgtaggcatagttgtatatcgtggtctatattttggattgtatgattctttgaag 786
||||| || || |||| || |||||||| || |||||| |||| ||||||||||||
Sbjct: 470 tgtgtgggaattattgtctaccgtggtctgtactttggaatgtacgattctttgaag 414
>KJC_s15897
Length = 526
Score = 139 bits (70), Expect = 1e-32
Identities = 118/134 (88%)
Strand = Plus / Plus
Query: 433 cctactcaagcctttaattttgcattcaaagattactttaaaagacttttcaactttaag 492
|||||||| ||||| || |||||||||||||||||||| || || || |||||||| |||
Sbjct: 377 cctactcaggccttgaactttgcattcaaagattacttcaagaggctcttcaacttcaag 436
Query: 493 aaggaccgcgacggttactggaagtggtttgctggtaacttagcttctggtggcgctgct 552
|| ||| | || || |||||||||||||||||||| |||||||| |||||||| ||||||
Sbjct: 437 aaagacagggatgggtactggaagtggtttgctggaaacttagcatctggtggtgctgct 496
Query: 553 ggtgcttcttccct 566
||||||||||||||
Sbjct: 497 ggtgcttcttccct 510
>KJC_c00186
Length = 1454
Score = 73.8 bits (37), Expect = 6e-13
Identities = 220/281 (78%)
Strand = Plus / Plus
Query: 280 aaactcctaattcaaaatcaaaatgagatgatcaaagctggtcggctctccgaaccctac 339
|||||| | ||||||||||| ||||||||||||| ||||||||| | || ||||| |||
Sbjct: 373 aaactcttgattcaaaatcaggatgagatgatcaaggctggtcggttatctgaaccatac 432
Query: 340 aaaggcattggagattgttttagcagaacaattaaagatgagggctttctatctctctgg 399
|| || || || || ||| ||||||||| ||||||||||| | || |||| |||
Sbjct: 433 aagggaatctctgactgctttgccagaacaataaaagatgagggtgtacttgctctatgg 492
Query: 400 agaggcaacgtaaccaatgtcattcgatattttcctactcaagcctttaattttgcattc 459
||||||||| | ||||| || ||||||| || || || || | || ||||| ||
Sbjct: 493 agaggcaacactgctaatgttatcagatatttccccacccaggctctgaactttgctttt 552
Query: 460 aaagattactttaaaagacttttcaactttaagaaggaccgcgacggttactggaagtgg 519
||||||||||| || || | ||||| |||||||||||| || || ||||||||||||
Sbjct: 553 aaagattacttcaagaggttgttcaattttaagaaggacaaagatggctactggaagtgg 612
Query: 520 tttgctggtaacttagcttctggtggcgctgctggtgcttc 560
|||||||| || || || |||||||| || |||||||||||
Sbjct: 613 tttgctgggaatttggcatctggtggagcagctggtgcttc 653