Jatropha Genome Database

JcCB0297821.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0297821.10 - phase: 0 /partial
         (757 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c01479                                                            581   e-166

>KJC_c01479 
          Length = 1409

 Score =  581 bits (293), Expect = e-166
 Identities = 293/293 (100%)
 Strand = Plus / Plus

                                                                       
Query: 465 tgaggagaaagaagtaggagatgcatctagtcattgtgctcttggattggtttgtaatgt 524
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24  tgaggagaaagaagtaggagatgcatctagtcattgtgctcttggattggtttgtaatgt 83

                                                                       
Query: 525 ggacgacattttgagtttgggtaatgaaataatgggtaatggagatacaggtgctgtgga 584
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84  ggacgacattttgagtttgggtaatgaaataatgggtaatggagatacaggtgctgtgga 143

                                                                       
Query: 585 tgagagatgtgtggagtttcatgagagtagtggggtttgttccgacggagatggtggagc 644
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 tgagagatgtgtggagtttcatgagagtagtggggtttgttccgacggagatggtggagc 203

                                                                       
Query: 645 tcctcatggagcttttggttttgcccttggttatctcggggtgcgggatcttcttgttgt 704
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 tcctcatggagcttttggttttgcccttggttatctcggggtgcgggatcttcttgttgt 263

                                                                
Query: 705 tgaaacagtgtgcaggtcattgcgctctacagttcggagtgacccacttttat 757
           |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tgaaacagtgtgcaggtcattgcgctctacagttcggagtgacccacttttat 316