Jatropha Genome Database

JcCB0297231.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0297231.10 + phase: 0 
         (783 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c00519                                                             54   5e-07

>KJC_c00519 
          Length = 1088

 Score = 54.0 bits (27), Expect = 5e-07
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                          
Query: 151 tgtcgactgcggtggtgcaaccagctctctccggaagttcagcaccg 197
           ||||| ||||||||||||||||||||||| ||| | ||| |||||||
Sbjct: 870 tgtcggctgcggtggtgcaaccagctctcgccgcaggttgagcaccg 824