Jatropha Genome Database
- JcCB0295461.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0295461.10 + phase: 2 /partial
(838 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c06881 741 0.0
KJC_c05730 276 8e-74
KJC_c12155 121 3e-27
>KJC_c06881
Length = 397
Score = 741 bits (374), Expect = 0.0
Identities = 381/382 (99%), Gaps = 1/382 (0%)
Strand = Plus / Plus
Query: 297 ttgccttggtctgttcatctcatatcatagttgcaaactgtggtgattcaagagcagtgc 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 ttgccttggtctgttcatctcatatcatagttgcaaactgtggtgattcaagagcagtgc 72
Query: 357 tttatcgtggaaaagagtcaatggcattgtcaattgatcataaaccaaacagagaagatg 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 tttatcgtggaaaagagtcaatggcattgtcaattgatcataaaccaaacagagaagatg 132
Query: 417 agtatgccaggattgaggcatctggaggcaaggtcatacagtggaatggacaccgtgttt 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 agtatgccaggattgaggcatctggaggcaaggtcatacagtggaatggacaccgtgttt 192
Query: 477 ttggtgttcttgccatgtctagatccattggtgatagatatttgaaaccatggattattc 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 ttggtgttcttgccatgtctagatccattggtgatagatatttgaaaccatggattattc 252
Query: 537 cagaaccagaagttatgtttgttcctcgagctagagaagatgaatgccttattttagcca 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 cagaaccagaagttatgtttgttcctcgagctagagaagatgaatgccttattttagcca 312
Query: 597 gtgatgggctgtgggatgtcatgacaaatgatgaagtctgtgaagtggctcgaaagcgga 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 gtgatgggctgtgggatgtcatgacaaatgatgaagtctgtgaagtggctcgaaagcgga 372
Query: 657 ttttgctctggc-acaaaaaga 677
|||||||||||| |||||||||
Sbjct: 373 ttttgctctggcaacaaaaaga 394
>KJC_c05730
Length = 539
Score = 276 bits (139), Expect = 8e-74
Identities = 142/143 (99%)
Strand = Plus / Minus
Query: 696 ctgaaagaggcaatggaattgatcccgcgtctcaagcagcagctgattacctttcaatgc 755
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 ctgaaagaggcaatggaattgatcccgcgtctcaagcagcagctgattacctttcaatgc 480
Query: 756 tggccttgcaaaaaggaagcaaggacaacatctcagtgattgtggtggatttgaaagctc 815
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 tggccttgcaaaaagaaagcaaggacaacatctcagtgattgtggtggatttgaaagctc 420
Query: 816 aaaggaagttcaagagcaaatct 838
|||||||||||||||||||||||
Sbjct: 419 aaaggaagttcaagagcaaatct 397
>KJC_c12155
Length = 737
Score = 121 bits (61), Expect = 3e-27
Identities = 139/165 (84%)
Strand = Plus / Minus
Query: 344 tcaagagcagtgctttatcgtggaaaagagtcaatggcattgtcaattgatcataaacca 403
|||||||| || || || ||||| ||||| | ||||||||||| | ||||||||||||
Sbjct: 458 tcaagagctgttctataccgtggtaaagaacctatggcattgtctgtggatcataaacca 399
Query: 404 aacagagaagatgagtatgccaggattgaggcatctggaggcaaggtcatacagtggaat 463
|| |||||||||| ||||| ||||| |||||| |||||||||| || ||||| ||||||
Sbjct: 398 aatcgagaagatgaatatgcgaggatagaggcagctggaggcaaagttatacaatggaat 339
Query: 464 ggacaccgtgtttttggtgttcttgccatgtctagatccattggt 508
|| || ||||| ||||| |||||||| ||||| ||||||||||||
Sbjct: 338 gggcatcgtgtctttggcgttcttgcaatgtcaagatccattggt 294