Jatropha Genome Database
- JcCB0292291.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0292291.10 + phase: 1 /pseudo/partial
(1320 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c05771 948 0.0
>KJC_c05771
Length = 919
Score = 948 bits (478), Expect = 0.0
Identities = 513/518 (99%), Gaps = 5/518 (0%)
Strand = Plus / Minus
Query: 450 cttactctcctgaagctactaaaaagtgactactataaacagtctgtgtctgtgaaagtt 509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 919 cttactctcctgaagctactaaaaagtgactactataaacagtctgtgtctgtgaaagtt 860
Query: 510 gagatattgcggtgcctttgtgatgatatgattgaagtggaagccattaggtcagagcta 569
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 859 gagatattgcggtgcctttgtgatgatatgattgaagtggaagccattaggtcagagcta 800
Query: 570 aatagaagatcttcaggctctgaatttgacctggactttgatcgaaatacgactattgga 629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 aatagaagatcttcaggctctgaatttgacctggactttgatcgaaatacgactattgga 740
Query: 630 gctctcaagaaaaagagagctgggatggacctgtctggtggctcttgcataaccgaggat 689
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 gctctcaagaaaaagagagctgggatggacctgtctggtggctcttgcataaccgaggat 680
Query: 690 gctgttgatgacagcactgactggaatagtgatgaatgttgtctttgtaagatggatggg 749
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 gctgttgatgacagcactgactggaatagtgatgaatgttgtctttgtaagatggatggg 620
Query: 750 agcctaatatgctgtgatggttgtcctgccgcctatcattcaaagtgtgtaggtgtggcc 809
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 agcctaatatgctgtgatggttgtcctgccgcctatcattcaaagtgtgtaggtgtggcc 560
Query: 810 aatgattccttgccagagggtgattggttctgccctgagtgtgccatagacaggcataag 869
||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct: 559 aatgattccttgccaga-ggtgattggttctg-cctgagtgtgccatagacaggcataag 502
Query: 870 ccttggatgaaacctcgaaagtcacttcgaggggcagagctatttggggttgatccttat 929
|||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||
Sbjct: 501 ccttggatgaaacctcgaaagtcacttcga-gggcagagcta-ttggggtt-atccttat 445
Query: 930 ggccgactatactttagcagctgtggttatttactggt 967
||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ggccgactatactttagcagctgtggttatttactggt 407
Score = 535 bits (270), Expect = e-152
Identities = 270/270 (100%)
Strand = Plus / Minus
Query: 968 cctgttagtttttatgaggcaaataataatcctggctctctaaatcatgctttatgttca 1027
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 cctgttagtttttatgaggcaaataataatcctggctctctaaatcatgctttatgttca 211
Query: 1028 gacacatgcatggccccagctgtgttggcatcttcagaaacatgtgtaacaaagaatgag 1087
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 gacacatgcatggccccagctgtgttggcatcttcagaaacatgtgtaacaaagaatgag 151
Query: 1088 actgtcagtgaaagaaaactagaagaaaagtttgtcacaggatgttctggtcatattaat 1147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 actgtcagtgaaagaaaactagaagaaaagtttgtcacaggatgttctggtcatattaat 91
Query: 1148 gttgaggtttcgaaggctcttagccaaacatgtgcgagttctgaagggtcggctgaaaca 1207
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90 gttgaggtttcgaaggctcttagccaaacatgtgcgagttctgaagggtcggctgaaaca 31
Query: 1208 attcaaacaagtttggaaaatcagaacttt 1237
||||||||||||||||||||||||||||||
Sbjct: 30 attcaaacaagtttggaaaatcagaacttt 1