Jatropha Genome Database
- JcCB0290191.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0290191.10 + phase: 0
(489 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c12118 565 e-161
KJC_c10306 297 1e-80
KJC_c03906 174 1e-43
KJC_c06446 127 3e-29
KJC_c02448 123 4e-28
KJC_c03168 80 6e-15
KJC_c04805 50 5e-06
>KJC_c12118
Length = 661
Score = 565 bits (285), Expect = e-161
Identities = 322/333 (96%), Gaps = 1/333 (0%)
Strand = Plus / Minus
Query: 144 gttcatatgtgaagtatgcaacaaaggttttcaaagagagcaaaacctacagctccacag 203
|||||||||||| |||||||||||||| || || || |||||||||||||||||||||||
Sbjct: 333 gttcatatgtgaggtatgcaacaaagggttccagagggagcaaaacctacagctccacag 274
Query: 204 aagaggacacaacctcccatggaagctaaagcaaaagactacaaaagaagtgaagaggaa 263
||||||||||||||| || |||||||||||||| || |||||||||||||||||||||||
Sbjct: 273 aagaggacacaacctaccttggaagctaaagcagaaaactacaaaagaagtgaagaggaa 214
Query: 264 agtgtatttatgccctgaacccacatgcgtccaccatgacccttctagggctcttggtga 323
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 agtgtatttatgccctgaacccacatgcgtccaccatgacccttctagggctcttggtga 154
Query: 324 ccttactggtatcaagaaacactattcaagaaaacatggtgagaa-aaaatggaagtgtg 382
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 153 ccttactggtatcaagaaacactattcaagaaaacatggtgagaaaaaaatggaagtgtg 94
Query: 383 agaaatgttcaaagagatatgctgtgcaatctgattggaaagcccattctaagacttgtg 442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 agaaatgttcaaagagatatgctgtgcaatctgattggaaagcccattctaagacttgtg 34
Query: 443 gcactagagaatatagatgtgactgtggcactc 475
|||| ||||||||||||||||||||||||||||
Sbjct: 33 gcaccagagaatatagatgtgactgtggcactc 1
>KJC_c10306
Length = 589
Score = 297 bits (150), Expect = 1e-80
Identities = 150/150 (100%)
Strand = Plus / Minus
Query: 144 gttcatatgtgaagtatgcaacaaaggttttcaaagagagcaaaacctacagctccacag 203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 gttcatatgtgaagtatgcaacaaaggttttcaaagagagcaaaacctacagctccacag 91
Query: 204 aagaggacacaacctcccatggaagctaaagcaaaagactacaaaagaagtgaagaggaa 263
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90 aagaggacacaacctcccatggaagctaaagcaaaagactacaaaagaagtgaagaggaa 31
Query: 264 agtgtatttatgccctgaacccacatgcgt 293
||||||||||||||||||||||||||||||
Sbjct: 30 agtgtatttatgccctgaacccacatgcgt 1
Score = 276 bits (139), Expect = 5e-74
Identities = 139/139 (100%)
Strand = Plus / Minus
Query: 1 atggctgctgcttcatcatcttcgccattttttcgggctagagaggaaaatcaaaaccag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 atggctgctgcttcatcatcttcgccattttttcgggctagagaggaaaatcaaaaccag 285
Query: 61 atattgcagcagcaaaattcatctacagctatttctgctcctcctcaaaagaaaaagaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 atattgcagcagcaaaattcatctacagctatttctgctcctcctcaaaagaaaaagaga 225
Query: 121 aatcagcctggaacaccaa 139
|||||||||||||||||||
Sbjct: 224 aatcagcctggaacaccaa 206
>KJC_c03906
Length = 556
Score = 174 bits (88), Expect = 1e-43
Identities = 155/176 (88%), Gaps = 1/176 (0%)
Strand = Plus / Minus
Query: 304 ccttctagggctcttggtgaccttactggtatcaagaaacactattcaagaaaacatggt 363
|||||||| ||||||||||||||||| ||||||| ||||||||| | |||||||||||
Sbjct: 394 ccttctagagctcttggtgaccttacaggtatca-gaaacactactgtagaaaacatgga 336
Query: 364 gagaaaaaatggaagtgtgagaaatgttcaaagagatatgctgtgcaatctgattggaaa 423
|| || |||||||| ||||| ||||||||||||| || ||||| |||||||||||||||
Sbjct: 335 gaaaagaaatggaaatgtgaaaaatgttcaaagatctacgctgttcaatctgattggaaa 276
Query: 424 gcccattctaagacttgtggcactagagaatatagatgtgactgtggcactctttt 479
|| |||||||| |||||||| |||||||| ||||||||||||||||| || |||||
Sbjct: 275 gctcattctaaaacttgtggaactagagagtatagatgtgactgtggaaccctttt 220
>KJC_c06446
Length = 815
Score = 127 bits (64), Expect = 3e-29
Identities = 164/196 (83%), Gaps = 1/196 (0%)
Strand = Plus / Minus
Query: 292 gtccaccatgacccttctagggctcttggtgaccttactggtatcaagaaacactattca 351
||||| |||||||| || ||||||||||| ||| | || || |||||||| |||| ||
Sbjct: 367 gtccatcatgacccatcaagggctcttggagacttaacaggaatcaagaagcacttttgc 308
Query: 352 agaaaacatggtgagaaaaaatgg-aagtgtgagaaatgttcaaagagatatgctgtgca 410
||||| ||||||||||| || ||| || ||||| || || |||||||| ||||| || ||
Sbjct: 307 agaaagcatggtgagaagaagtgggaaatgtgataagtgctcaaagaggtatgcggttca 248
Query: 411 atctgattggaaagcccattctaagacttgtggcactagagaatatagatgtgactgtgg 470
||| ||||||||||| || || || || ||||||||||||||||| ||||||||||||||
Sbjct: 247 atcagattggaaagctcactccaaaacatgtggcactagagaatacagatgtgactgtgg 188
Query: 471 cactcttttttcaagg 486
|||||||| ||||||
Sbjct: 187 aactcttttctcaagg 172
>KJC_c02448
Length = 719
Score = 123 bits (62), Expect = 4e-28
Identities = 242/302 (80%)
Strand = Plus / Minus
Query: 163 aacaaaggttttcaaagagagcaaaacctacagctccacagaagaggacacaacctccca 222
|||||||| ||||||||||| ||||| || || || || |||||||| || ||||| |||
Sbjct: 666 aacaaaggatttcaaagagatcaaaatcttcaacttcatagaagaggtcataacctgcca 607
Query: 223 tggaagctaaagcaaaagactacaaaagaagtgaagaggaaagtgtatttatgccctgaa 282
|||||| ||||||||| || | || ||||||| || ||| || ||| |||| || |||
Sbjct: 606 tggaagttaaagcaaagaacaaacaaggaagtgaggaagaaggtatatgtatgtccagaa 547
Query: 283 cccacatgcgtccaccatgacccttctagggctcttggtgaccttactggtatcaagaaa 342
| ||||| || || |||||||| || || ||||| || |||||||| || ||||| ||
Sbjct: 546 gctacatgtgtacatcatgacccatcaagagctctaggagaccttacaggaatcaaaaac 487
Query: 343 cactattcaagaaaacatggtgagaaaaaatggaagtgtgagaaatgttcaaagagatat 402
||| | ||||| ||||||||||| || ||||||||||| || || || || | |||
Sbjct: 486 aactttagcagaaagcatggtgagaagaagtggaagtgtgaaaagtgctctaaacgttat 427
Query: 403 gctgtgcaatctgattggaaagcccattctaagacttgtggcactagagaatatagatgt 462
|| || |||||||| |||||||||||||| |||| ||||||||| ||||| |||||||||
Sbjct: 426 gccgttcaatctgactggaaagcccattccaagatttgtggcacaagagagtatagatgt 367
Query: 463 ga 464
||
Sbjct: 366 ga 365
>KJC_c03168
Length = 846
Score = 79.8 bits (40), Expect = 6e-15
Identities = 109/132 (82%)
Strand = Plus / Plus
Query: 355 aaacatggtgagaaaaaatggaagtgtgagaaatgttcaaagagatatgctgtgcaatct 414
||||| || ||||| || ||||| || || || ||||| |||| |||||| || || |||
Sbjct: 146 aaacacggcgagaagaagtggaaatgcgataagtgttcgaagaaatatgcagttcagtct 205
Query: 415 gattggaaagcccattctaagacttgtggcactagagaatatagatgtgactgtggcact 474
||||||||||| || || || | |||||||||||| ||||||| ||| || ||||| |||
Sbjct: 206 gattggaaagctcactccaaaatttgtggcactagggaatataaatgcgattgtggaact 265
Query: 475 cttttttcaagg 486
||||||||||||
Sbjct: 266 cttttttcaagg 277
>KJC_c04805
Length = 897
Score = 50.1 bits (25), Expect = 5e-06
Identities = 61/73 (83%)
Strand = Plus / Minus
Query: 379 tgtgagaaatgttcaaagagatatgctgtgcaatctgattggaaagcccattctaagact 438
||||||||||| || || | |||||||| |||||||||| ||||| ||| ||||||
Sbjct: 504 tgtgagaaatgctctaaaggttatgctgttcaatctgattacaaagctcatctcaagact 445
Query: 439 tgtggcactagag 451
|||||||||||||
Sbjct: 444 tgtggcactagag 432