Jatropha Genome Database

JcCB0288881.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0288881.10 - phase: 0 /partial
         (480 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c02463                                                            391   e-108

>KJC_c02463 
          Length = 1078

 Score =  391 bits (197), Expect = e-108
 Identities = 204/205 (99%), Gaps = 1/205 (0%)
 Strand = Plus / Minus

                                                                       
Query: 277 ggtagctgccaaggagtgatcgcattaaatatggaggatggaacattacatcgattccgt 336
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 ggtagctgccaaggagtgatcgcattaaatatggaggatggaacattacatcgattccgt 315

                                                                       
Query: 337 gctgcttcaactatcctggccactgggggctatggtagagcgtacttttctgcaacctca 396
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 gctgcttcaactatcctggccactgggggctatggtagagcgtacttttctgcaacctca 255

                                                                       
Query: 397 gctcatacatgtactggagatggcaatgctatggttgcaagggctgggcttccactaca- 455
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 254 gctcatacatgtactggagatggcaatgctatggttgcaagggctgggcttccactacag 195

                                    
Query: 456 gatcttgagtttgttcaatttcatc 480
           |||||||||||||||||||||||||
Sbjct: 194 gatcttgagtttgttcaatttcatc 170