Jatropha Genome Database

JcCB0287851.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0287851.10 + phase: 2 /pseudo/partial
         (461 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c03460                                                             76   8e-14

>KJC_c03460 
          Length = 894

 Score = 75.8 bits (38), Expect = 8e-14
 Identities = 59/66 (89%)
 Strand = Plus / Minus

                                                                       
Query: 126 aaagaatgacatcgctgcagccattactagaactgatatatttgattttttggtggatat 185
           |||||||||||| || |||||||| || |||||||||||||||||||| || || |||||
Sbjct: 523 aaagaatgacattgcagcagccatcacaagaactgatatatttgatttcttagttgatat 464

                 
Query: 186 tgtgcc 191
           ||||||
Sbjct: 463 tgtgcc 458