Jatropha Genome Database

JcCB0287701.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0287701.10 - phase: 0 /partial/short
         (123 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c03927                                                             72   3e-13

>KJC_c03927 
          Length = 1134

 Score = 71.9 bits (36), Expect = 3e-13
 Identities = 61/68 (89%), Gaps = 1/68 (1%)
 Strand = Plus / Plus

                                                                       
Query: 28  ggaacaactttgaaggatctatctgatgtaacacatggatggaatgaggtttcaacaact 87
           |||||||||||||||||| | |||||||| || |||||||||| ||| |||||||| |||
Sbjct: 704 ggaacaactttgaaggatatctctgatgtgacccatggatggagtga-gtttcaactact 762

                   
Query: 88  cgttgggt 95
           ||||||||
Sbjct: 763 cgttgggt 770