Jatropha Genome Database
- JcCB0286011.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0286011.20 + phase: 0
(992 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c09710 563 e-160
KJC_c10215 143 9e-34
>KJC_c09710
Length = 314
Score = 563 bits (284), Expect = e-160
Identities = 298/300 (99%), Gaps = 2/300 (0%)
Strand = Plus / Minus
Query: 8 gcaataaagaa-gaggcagcaagggcgaaggggattgctgagcaaaagatgcgaaacaat 66
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 gcaataaagaaagaggcagcaagggcgaaggggattgctgagcaaaagatgcgaaacaat 240
Query: 67 gattttgttggtgctcataaaattgcactcagagcccaacatctttataaagatttggac 126
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 239 gattttgttggtgctcataaaattgcactcagagcccaacatctttataa-gatttggac 181
Query: 127 aatatttcccagatgctaatggtttgtgctgtgcattgtgctgctgataagaaactgttt 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 aatatttcccagatgctaatggtttgtgctgtgcattgtgctgctgataagaaactgttt 121
Query: 187 gggaatgagatggactggtatggcatccttcagattgagccgacagctgatgaggccaca 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 gggaatgagatggactggtatggcatccttcagattgagccgacagctgatgaggccaca 61
Query: 247 attaagaagcagtacaggaagtttgctctcttacttcaccctgacaaaaataagttcccc 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 attaagaagcagtacaggaagtttgctctcttacttcaccctgacaaaaataagttcccc 1
>KJC_c10215
Length = 704
Score = 143 bits (72), Expect = 9e-34
Identities = 373/472 (79%), Gaps = 6/472 (1%)
Strand = Plus / Minus
Query: 419 cgccttacatgcctcatcagagagcaacttatagctcaaaaattggggttcaaaacaatt 478
||||||||| |||||| ||||||||| |||| | ||| | |||||||||||||||||||
Sbjct: 702 cgccttacaggcctcaacagagagcagcttacacctctagtattggggttcaaaacaatt 643
Query: 479 ataggagcaacttcgtgggcttcaatcttcaacaggagcacacacagcagtcaatacatc 538
|||| |||||| |||||||||||| ||||||| | || | |||||||| |||
Sbjct: 642 ccaggaacaactttatgggcttcaatcctcaacagcaacatatgcagcagtcgg---atc 586
Query: 539 aacaggggtccatcaatggtcatgcgactttccagacggcttgtccattctgtgatgtga 598
||||||| ||| |||||| | ||| |||||| ||| |||||||||| |||| |||| |
Sbjct: 585 aacagggttcctccaatggccgtgctactttctggacagcttgtccatactgtaatgtaa 526
Query: 599 agtaccagtatcatgttaatcttttgtataggtatcttctttgtcaaaattgtagtaagc 658
|||||||||| |||| | || | ||| || |||| |||| |||| ||| | |||||
Sbjct: 525 agtaccagtactatgtggaaattaagaataagtctcttatttgccaaacttgcactaagc 466
Query: 659 actttatagcacgtcattgtcttgcgcaaggggctccaacaggaactaattcgaaccaat 718
||||| |||| | | | || ||||||||||||||| |||||||| | | ||| |
Sbjct: 465 cttttattgcacatgagcggagtgtgcaaggggctccaactggaactaacttcagccagt 406
Query: 719 cagcaattcccccaaggaaagatgtgccaaatcatggttctatcaaag---aacttgacc 775
| ||| |||||||||| ||||||||||||||| || ||| || ||||| ||||| |||
Sbjct: 405 cggcatttcccccaagaaaagatgtgccaaataatagttttagcaaagtagaacttaacc 346
Query: 776 gtcagaacaattcaagttctgagcaatctaaaaccgagtcctttcaaaagaaaggttgcg 835
||||| ||| |||||| |||||||| |||||| || | |||||||||||||||||||
Sbjct: 345 gtcagggcaagtcaagtgctgagcaacctaaaatggatttctttcaaaagaaaggttgca 286
Query: 836 atcccaagttggcttcacaaaaggcaaatggcaaaaggcggaggaaaaaaga 887
|| | |||| |||||||||||||||||||| || || || ||||| |||||
Sbjct: 285 attctgagtttgcttcacaaaaggcaaatgggaagagacgaaggaagaaaga 234