Jatropha Genome Database
- JcCB0285141.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0285141.10 - phase: 0 /partial
(1237 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c01854 636 0.0
KJC_c01037 98 6e-20
>KJC_c01854
Length = 1150
Score = 636 bits (321), Expect = 0.0
Identities = 868/1049 (82%), Gaps = 1/1049 (0%)
Strand = Plus / Plus
Query: 67 attgctgagaaaggattccccatttctgtttacaatcggaccgcttcaaaagttgatgag 126
||||| || ||||| || |||||||||||||| ||||| || | || ||||||||||||
Sbjct: 101 attgcagaaaaaggctttcccatttctgtttataatcgaactacctccaaagttgatgag 160
Query: 127 acagttgcgcgagccaaacaagagggagatcttcctttatatggcttccgtgatcctgaa 186
|| |||| |||| ||| |||||||||||||| ||||||||||||| ||||||||||
Sbjct: 161 actgttgaaagagctaaaagggagggagatcttcccttatatggcttccatgatcctgaa 220
Query: 187 tcctttgttaattcaattcaaaaaccacgtgtgataatcatgcttgtcaaggctggaccc 246
| |||||| | ||||| |||| | | | |||||||| |||||||| |||||||| |
Sbjct: 221 gcttttgttcagtcaatccaaagcctagg-gtgataattatgcttgttaaggctggggca 279
Query: 247 cctgttgaccaaaccatcaagactttgtcagtttatatggagaaaggggactgcatcata 306
|||||||| ||||| || |||||| | || | || ||||||||||| ||||| |||||
Sbjct: 280 cctgttgatcaaactataaagactctctctgcctacatggagaaaggtgactgtatcatt 339
Query: 307 gatggtggtaatgagtggtatgagaacacggagaggagagagaaagccatggctgatctg 366
|||||||| |||||||||||||||||||| ||||||||||| || ||||||||||| ||
Sbjct: 340 gatggtgggaatgagtggtatgagaacactgagaggagagaaaaggccatggctgagttg 399
Query: 367 ggtttactttatctcggaatgggagtttcaggtggtgaagagggtgcgcggcatggacct 426
||||| || ||||| |||||||||||||||||||||||||||||||| ||| |||||||
Sbjct: 400 ggtttgctctatcttggaatgggagtttcaggtggtgaagagggtgcccggaatggaccc 459
Query: 427 tctttaatgcctggaggttcctttgaggcctacaaatacatagaagacatcctccttaag 486
||||| ||||||||||||||||||||||| ||||| ||||| ||||| || || |||||
Sbjct: 460 tctttgatgcctggaggttcctttgaggcatacaagtacattgaagatattcttcttaaa 519
Query: 487 gtggcagctcaggttcgtgatagtggcccgtgtgtcacttatattggcaaaggaggatct 546
||||||||||| |||| |||||||||||| ||||| ||||||||||| ||||| || |||
Sbjct: 520 gtggcagctcaagttcctgatagtggcccctgtgtgacttatattgggaaaggtgggtct 579
Query: 547 ggcaattttgtcaagatggttcacaatgggattgaatatggcgacatgcagctgattgca 606
|| || ||||||||||||||||| ||||| ||||||||||| || |||||| ||||||||
Sbjct: 580 ggtaactttgtcaagatggttcataatggaattgaatatggtgatatgcagttgattgca 639
Query: 607 gaagcttatgatgtgctgaaatcagttgggaagctcaccaatgaagaattacgccaggtt 666
|| ||||||||||| || ||||||||||| ||| | | ||||| ||| | | |||
Sbjct: 640 gaggcttatgatgtactaaaatcagttggaaagttgtcaaatgaggaactccaaagtgtt 699
Query: 667 ttctctgagtggaacaaaggggagcttatgagtttcttgattgagattacagctgatatt 726
||| | || |||||||| || || ||| |||| |||||||||||||| || || |||||
Sbjct: 700 ttcgcagaatggaacaagggtgaacttctgagcttcttgattgagatcactgcagatata 759
Query: 727 tttggaattagggacgataagggagatgggtacttggttgacaaggttttggataaaact 786
|||||||||| || ||||||||||| || || |||||||||||||||||||| ||||||
Sbjct: 760 tttggaattaaagatgataagggagaaggatatttggttgacaaggttttggacaaaact 819
Query: 787 ggcatgaaaggtactggtaaatggacagttcagcaagctgctgagttatcagtagctgct 846
|| ||||| ||||| ||||||||||| || |||||||||||||| | ||||| || |||
Sbjct: 820 ggaatgaagggtacaggtaaatggactgtacagcaagctgctgatctctcagttgcagct 879
Query: 847 cctactatagcatcatctttggatggaagatttcttagtggtttgaaagaagaaaggatt 906
|| || || ||||| |||||||||| |||||| |||||||||||||| || ||| | ||
Sbjct: 880 cccacaattgcatcttctttggatgcaagattccttagtggtttgaaggaggaacgagtt 939
Query: 907 gaagctgccaagattttcaaatcaagtggtgttggagacatcctagctgatcaagttgtt 966
|||||||| || | |||||| || |||| ||||||| | | || |||||||| |||
Sbjct: 940 gaagctgctaaagtcttcaaagcaggtggctttggagatgttttggccgatcaagtggtt 999
Query: 967 aataaggaaaagttgattggcgatgcggggcaagcactttatgcttctaaaatatgtagc 1026
| ||| | |||||||||| ||||| | | ||||| |||||||| || || || |||||
Sbjct: 1000 gacaagaagaagttgattgacgatgtgagacaagctctttatgcatccaagatttgtagt 1059
Query: 1027 tatgctcaaggaatgaacttgattcgtgcaaagagtgctgaaaagggatgggacttgaaa 1086
||||| ||||| ||||| |||| ||||| |||||| ||| || |||||||||||||||
Sbjct: 1060 tatgcacaagggatgaatctgatccgtgccaagagtattgagaaaggatgggacttgaaa 1119
Query: 1087 cttggggagctggcaagaatttggaaggg 1115
|| || || ||||| || |||||||||||
Sbjct: 1120 ctgggagaactggctaggatttggaaggg 1148
>KJC_c01037
Length = 1846
Score = 97.6 bits (49), Expect = 6e-20
Identities = 115/137 (83%)
Strand = Plus / Plus
Query: 700 ttcttgattgagattacagctgatatttttggaattagggacgataagggagatgggtac 759
|||||||||||||||||| |||||||||| | ||| ||||| | ||||||||| |
Sbjct: 749 ttcttgattgagattacatctgatattttcagggttaaagacgaacatggagatggggaa 808
Query: 760 ttggttgacaaggttttggataaaactggcatgaaaggtactggtaaatggacagttcag 819
||||| || ||| |||||||||| ||||| |||||||| ||||| |||||||| || |||
Sbjct: 809 ttggtcgataagattttggataagactggaatgaaaggaactggaaaatggactgtccag 868
Query: 820 caagctgctgagttatc 836
|||||||||||| ||||
Sbjct: 869 caagctgctgagctatc 885
Score = 65.9 bits (33), Expect = 2e-10
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 514 ccgtgtgtcacttatattggcaaaggaggatctggcaattttgtcaagatggttcacaat 573
|||||||| ||||||||||| |||| |||||||| |||||||| |||||||| || |||
Sbjct: 563 ccgtgtgtgacttatattggtgaaggtggatctggtaattttgttaagatggtgcataat 622
Query: 574 gggat 578
|||||
Sbjct: 623 gggat 627