Jatropha Genome Database
- JcCB0281811.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0281811.10 - phase: 0 /partial
(862 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c03163 1693 0.0
>KJC_c03163
Length = 1285
Score = 1693 bits (854), Expect = 0.0
Identities = 861/862 (99%), Gaps = 1/862 (0%)
Strand = Plus / Minus
Query: 1 atggtaggcggtttcgaagttggcgccgtccctttcaaccccgacggctggggtccgcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1251 atggtaggcggtttcgaagttggcgccgtccctttcaaccccgacggctggggtccgcca 1192
Query: 61 gacgccacaacgggcaccaccacatccactctccctctccacgttcccttcgcccccttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1191 gacgccacaacgggcaccaccacatccactctccctctccacgttcccttcgcccccttc 1132
Query: 121 tcccgatcagaaaaactcggtcggatcgccgattggacccgtaacgtcaacaatcctaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1131 tcccgatcagaaaaactcggtcggatcgccgattggacccgtaacgtcaacaatcctaat 1072
Query: 181 gcaaatcggccaaacgccaacaagaacgcttcggattccgtttttgacttcaccgccgat 240
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1071 gcaaatcggccaaacgccaacaagaacgcttcggat-ccgtttttgacttcaccgccgat 1013
Query: 241 gattccttccctgctgcagctggtgcagccgatgatgactcgaccttccgtctcgttgat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 gattccttccctgctgcagctggtgcagccgatgatgactcgaccttccgtctcgttgat 953
Query: 301 ggaaaacctcctccacgccctaaattcggccctaagtggcgattcaatcaacaccgcccg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 952 ggaaaacctcctccacgccctaaattcggccctaagtggcgattcaatcaacaccgcccg 893
Query: 361 caactccctcagcgtcgcgatgaagaggtggaggctcgcaaacgtgaggcggaaaaggaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892 caactccctcagcgtcgcgatgaagaggtggaggctcgcaaacgtgaggcggaaaaggaa 833
Query: 421 cgggcgcgccgggatcgcctatacaatctcaatcgatccaatcaaaaccagccacgtcgc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 832 cgggcgcgccgggatcgcctatacaatctcaatcgatccaatcaaaaccagccacgtcgc 773
Query: 481 gaggcggcagctttcaagtcatctgtggatatccagccggagtggaacatgttggaccag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 gaggcggcagctttcaagtcatctgtggatatccagccggagtggaacatgttggaccag 713
Query: 541 attcccttctcaacgttttcaaagctgtcattctcagtcgctgagccagaagatttactt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 attcccttctcaacgttttcaaagctgtcattctcagtcgctgagccagaagatttactt 653
Query: 601 ctctgcggcgggcttgagttctacgacagatcatatgatagagtcacccctaaaaacgag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 ctctgcggcgggcttgagttctacgacagatcatatgatagagtcacccctaaaaacgag 593
Query: 661 cgtcgtttggagagattcaaaaaccgaaactttttcaaagtcaccacgactgatgatcct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 cgtcgtttggagagattcaaaaaccgaaactttttcaaagtcaccacgactgatgatcct 533
Query: 721 gtgattcggagacttgccaatgaagataaggctactgtgtttgctacggatactatcctg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 gtgattcggagacttgccaatgaagataaggctactgtgtttgctacggatactatcctg 473
Query: 781 gcaactttgatgtgtgcgcctaggtcggtatattcgtgggatattgtgattcagagagtt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 gcaactttgatgtgtgcgcctaggtcggtatattcgtgggatattgtgattcagagagtt 413
Query: 841 ggaaacaagctctttttcgata 862
||||||||||||||||||||||
Sbjct: 412 ggaaacaagctctttttcgata 391