Jatropha Genome Database

JcCB0280191.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0280191.10 + phase: 0 /pseudo/partial
         (480 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c09861                                                            278   1e-74

>KJC_c09861 
          Length = 622

 Score =  278 bits (140), Expect = 1e-74
 Identities = 154/156 (98%), Gaps = 2/156 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   tgtgaactggcgaagaaggaaatggaatatgatgataagagaattcgggctttgcaggag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 tgtgaactggcgaagaaggaaatggaatatgatgataagagaattcgggctttgcaggag 99

                                                                       
Query: 61  aggctattgaatggaattaaagctaaacttgatgg-agttgtggtaaatggtagtgtaga 119
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 98  aggctattgaatggaattaaagctaaacttgatggtagttgtggtaaatggtagtgtaga 39

                                               
Query: 120 gaggcgatatgcagggaatctg-aatgtttcttttg 154
           |||||||||||||||||||||| |||||||||||||
Sbjct: 38  gaggcgatatgcagggaatctgtaatgtttcttttg 3