Jatropha Genome Database
- JcCB0265081.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0265081.10 + phase: 2 /partial
(694 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c05208 1243 0.0
>KJC_c05208
Length = 1256
Score = 1243 bits (627), Expect = 0.0
Identities = 668/675 (98%), Gaps = 5/675 (0%)
Strand = Plus / Minus
Query: 1 atttttgctgtctttgccactagaagaacgtatgaagaaattgcttatagaggggcctcc 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1167 atttttgctgtctttgccactagaagaacgtatgaagaaattgcttatagaggg-cctcc 1109
Query: 61 agttcaaaggtttagtgttcttaagcactttgctccagaggacactgttgaagatgtctt 120
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1108 agttcaaaggtt-agtgttcttaagcactttgctccagaggacactgttgaagatg-ctt 1051
Query: 121 aacagttgttcagaagcatggacaattagtgcagggactttgggctccaaggactgcttt 180
|||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 1050 aacagttgttcagaagcatggacaattagtgcagggactt-gggctccaagg-ctgcttt 993
Query: 181 gctgtttccagattcaaaggaagtttacaaacctcctgctagagattatattcttctttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 992 gctgtttccagattcaaaggaagtttacaaacctcctgctagagattatattcttctttt 933
Query: 241 atttagcaagagtttggtgatcagcacttcacaaattaccagcttgcccgcgaggcttaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 932 atttagcaagagtttggtgatcagcacttcacaaattaccagcttgcccgcgaggcttaa 873
Query: 301 agaacctgtcagagcctttctcaatttgtttgctgttgaaaggccttccttcagggattg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 872 agaacctgtcagagcctttctcaatttgtttgctgttgaaaggccttccttcagggattg 813
Query: 361 gaagtttaaagagtcaccagatgcagcatttatgaaactccaccctgaagttgttaaaaa 420
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 812 gaagtttaaagaggcaccagatgcagcatttatgaaactccaccctgaagttgttaaaaa 753
Query: 421 gcaagtagtaatttgggaaggagtagagaaaaaattgaccggctttctttcttcttcaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 gcaagtagtaatttgggaaggagtagagaaaaaattgaccggctttctttcttcttcaag 693
Query: 481 taaaggtggaaaacaaaatgataaacgacagcccaccttggctcataatcttacaaaaga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 taaaggtggaaaacaaaatgataaacgacagcccaccttggctcataatcttacaaaaga 633
Query: 541 actcgatcctcacaaaattgcacccaaaagtgcaagtgtaaatagagtgcccattagaac 600
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 632 actcgatcctcacaaaattgcacccaaaagtgcaagtgtaaatagagtccccattagaac 573
Query: 601 aactataacatctgaaagtcgagaagctttactaaaggtcctgccaaaagttcttcaaac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 aactataacatctgaaagtcgagaagctttactaaaggtcctgccaaaagttcttcaaac 513
Query: 661 tcacaaggtttgcag 675
|||||||||||||||
Sbjct: 512 tcacaaggtttgcag 498