Jatropha Genome Database

JcCB0254931.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0254931.10 - phase: 0 
         (234 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c10136                                                            446   e-125

>KJC_c10136 
          Length = 593

 Score =  446 bits (225), Expect = e-125
 Identities = 225/225 (100%)
 Strand = Plus / Minus

                                                                       
Query: 10  gctatagccactgttgtcactgttgcagaaatcctgaaaaacaatggattggctattgaa 69
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 gctatagccactgttgtcactgttgcagaaatcctgaaaaacaatggattggctattgaa 428

                                                                       
Query: 70  aagaagatcatgacttcaacagttgatatgagagatgaagcaagagggcggcctgtacag 129
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 aagaagatcatgacttcaacagttgatatgagagatgaagcaagagggcggcctgtacag 368

                                                                       
Query: 130 aaagctaagattgagatattgctcgggaaaactgaaaatttcgatgaattgatggctgct 189
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 aaagctaagattgagatattgctcgggaaaactgaaaatttcgatgaattgatggctgct 308

                                                        
Query: 190 gctgctgaagagagggaaatggcagatgctgaagagcagagttga 234
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 gctgctgaagagagggaaatggcagatgctgaagagcagagttga 263