Jatropha Genome Database
- JcCB0254711.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0254711.10 + phase: 0 /partial
(765 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c00757 795 0.0
KJC_c01433 313 3e-85
KJC_c00060 305 8e-83
KJC_s18211 168 1e-41
KJC_c01705 143 7e-34
KJC_c12645 84 6e-16
>KJC_c00757
Length = 826
Score = 795 bits (401), Expect = 0.0
Identities = 410/413 (99%)
Strand = Plus / Minus
Query: 1 atgcttaatgatggaaaatcaagattctcaattaagggcaaacctatttaccactttgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 atgcttaatgatggaaaatcaagattctcaattaagggcaaacctatttaccactttgtt 356
Query: 61 gggacatccacttttagtgagtacactgttatgcatgttggctgtgtggccaaaatcaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 gggacatccacttttagtgagtacactgttatgcatgttggctgtgtggccaaaatcaat 296
Query: 121 cctttggctcctcttgacaaagtctgtgttctaagttgtggaatctccacaggtcttggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 cctttggctcctcttgacaaagtctgtgttctaagttgtggaatctccacaggtcttggt 236
Query: 181 gccactcttaatgttgctaagcctccaaaaggttcaactgttgctatttttggattggga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 gccactcttaatgttgctaagcctccaaaaggttcaactgttgctatttttggattggga 176
Query: 241 gctgtaggtcttgctgctgctgaaggggctaggattgctggggcttcaagaataattggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 gctgtaggtcttgctgctgctgaaggggctaggattgctggggcttcaagaataattggt 116
Query: 301 gttgatctgaattcaagtagatttgaagaagcaaagaaatttggagtaactgagtttgtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115 gttgatctgaattcaagtagatttgaagaagcaaagaaatttggagtaactgagtttgtg 56
Query: 361 aacccaaaacatcacaaaaggccagttcaagaggttattgctgaaatgactga 413
||||||||||||||||||| ||| |||||||||||||||||| ||||||||||
Sbjct: 55 aacccaaaacatcacaaaaagcctgttcaagaggttattgctcaaatgactga 3
>KJC_c01433
Length = 1400
Score = 313 bits (158), Expect = 3e-85
Identities = 428/518 (82%)
Strand = Plus / Minus
Query: 13 ggaaaatcaagattctcaattaagggcaaacctatttaccactttgttgggacatccact 72
||||||||||||||||| ||||| |||||||| |||||||| ||| |||| || || |||
Sbjct: 942 ggaaaatcaagattctccattaaaggcaaacccatttaccattttcttggaacctcaact 883
Query: 73 tttagtgagtacactgttatgcatgttggctgtgtggccaaaatcaatcctttggctcct 132
||||| | ||||| || | ||| ||||||||| ||||| ||||||||||||||||||
Sbjct: 882 tttagccaatacacagtagttcattctggctgtgttgccaagatcaatcctttggctcct 823
Query: 133 cttgacaaagtctgtgttctaagttgtggaatctccacaggtcttggtgccactcttaat 192
||||||||||||| | |||| ||||||||| | | ||||| ||||||| ||| | |||
Sbjct: 822 cttgacaaagtctttcttctcagttgtggattttgtacaggatttggtgctactgtaaat 763
Query: 193 gttgctaagcctccaaaaggttcaactgttgctatttttggattgggagctgtaggtctt 252
||||| || ||||||||||||||||| || || || |||||||| ||||| || ||||||
Sbjct: 762 gttgcaaaacctccaaaaggttcaacagtggcaatctttggattaggagcagtgggtctt 703
Query: 253 gctgctgctgaaggggctaggattgctggggcttcaagaataattggtgttgatctgaat 312
|||||||||||||||||||| || ||||||| || ||||| |||||||||||| |||||
Sbjct: 702 gctgctgctgaaggggctagagtttctggggcctctagaattattggtgttgatgtgaat 643
Query: 313 tcaagtagatttgaagaagcaaagaaatttggagtaactgagtttgtgaacccaaaacat 372
||| || ||||||| |||| ||||| ||||| ||||| ||||| ||||| |||||| |
Sbjct: 642 ccaaataaatttgaacaagctaagaagtttggggtaacagagttcgtgaatccaaaagac 583
Query: 373 cacaaaaggccagttcaagaggttattgctgaaatgactgatggaggagccgacagaagt 432
||||| | ||| || ||||||||| | ||||| |||||| ||||||| | || ||||
Sbjct: 582 cacaagaagcctgtccaagaggttttagctgagatgactaatggaggtgtagatcgaagc 523
Query: 433 gtggagtgtacaggaaacattgatgcgatgatctctgcatttgaatgtgtacatgatggt 492
| ||||| |||||||| | | || ||||| |||||||||||| |||| |||||||||
Sbjct: 522 attgagtgcacaggaaatgtccaggccatgatttctgcatttgaaagtgttcatgatggt 463
Query: 493 tggggtgttgctgttctggttggagtgccacacaaaga 530
||||||||||||||||| || || ||||| |||||||
Sbjct: 462 tggggtgttgctgttcttgtaggggtgcctaacaaaga 425
>KJC_c00060
Length = 1411
Score = 305 bits (154), Expect = 8e-83
Identities = 513/630 (81%), Gaps = 2/630 (0%)
Strand = Plus / Plus
Query: 46 atttaccactttgttgggacatccacttttagtgagtacactgttatgcatgttggctgt 105
|||||||||||| | || || || ||||| ||||| ||||||||| | ||||| || |||
Sbjct: 495 atttaccactttctgggcacctctactttcagtgaatacactgttgttcatgtcggttgt 554
Query: 106 gtggccaaaatcaatcctttggctcctcttgacaaagtctgtgttctaagttgtggaatc 165
|| ||||| ||||| ||| ||||||||||||||||| ||||| || ||||||||||||
Sbjct: 555 gttgccaagatcaaccctgatgctcctcttgacaaagtttgtgtactcagttgtggaatc 614
Query: 166 tccacaggtcttggtgccactcttaatgttgctaagcctccaaaaggttcaa-ctgttgc 224
|| |||||||||||||||||| | || ||||| || || | |||||| ||| |||||||
Sbjct: 615 tctacaggtcttggtgccactttgaacgttgcgaaacc-caaaaagggtcagtctgttgc 673
Query: 225 tatttttggattgggagctgtaggtcttgctgctgctgaaggggctaggattgctggggc 284
|||||||||||||| ||||| || ||||||||||| |||||||| || || |||| ||
Sbjct: 674 aatttttggattgggcgctgttggccttgctgctgcagaaggggcaagaatgtctggagc 733
Query: 285 ttcaagaataattggtgttgatctgaattcaagtagatttgaagaagcaaagaaatttgg 344
|||||| ||||| ||||| ||| ||||| | ||| |||||||||| || ||||| |||||
Sbjct: 734 ttcaaggataatcggtgtagatttgaatgccagtcgatttgaagatgccaagaagtttgg 793
Query: 345 agtaactgagtttgtgaacccaaaacatcacaaaaggccagttcaagaggttattgctga 404
|| |||||||||||||| |||||| |||| | | ||| |||||| |||| ||||||||
Sbjct: 794 tgttactgagtttgtgaatccaaaagatcatgacaagcctgttcaacaggtaattgctga 853
Query: 405 aatgactgatggaggagccgacagaagtgtggagtgtacaggaaacattgatgcgatgat 464
|||||||||||| |||| || | || ||||| || || |||| || | || |||||
Sbjct: 854 aatgactgatgggggagttgatcggagcgtggaatgcactggaagtatccaagccatgat 913
Query: 465 ctctgcatttgaatgtgtacatgatggttggggtgttgctgttctggttggagtgccaca 524
||| |||||||||||||| ||||||||||||||||||||||| || |||||||| ||| |
Sbjct: 914 ctcagcatttgaatgtgttcatgatggttggggtgttgctgtacttgttggagtcccaaa 973
Query: 525 caaagaagcagttttcaagacccatcccatgaatgtcttgaatgaaagaactctcaaagg 584
||| || | | ||||| || |||||||||||| | ||||| || |||||||| |||||
Sbjct: 974 caaggatgatgcattcaaaactcatcccatgaatctgttgaacgagagaactctgaaagg 1033
Query: 585 tacattctttggaaactacaagccaagaactgaccttccgtcagttgtggaaaaatacat 644
|| |||||||| || |||||||| | | || ||||| || ||||| || || |||||
Sbjct: 1034 aaccttctttggcaattacaagcctcgcagcgatcttccttctgttgttgagaagtacat 1093
Query: 645 gaacaaggagcttgaacttgaaaagttcat 674
||| |||||||| ||| | || ||||||||
Sbjct: 1094 gaaaaaggagctagaagtggagaagttcat 1123
>KJC_s18211
Length = 516
Score = 168 bits (85), Expect = 1e-41
Identities = 237/285 (83%), Gaps = 2/285 (0%)
Strand = Plus / Minus
Query: 46 atttaccactttgttgggacatccacttttagtgagtacactgttatgcatgttggctgt 105
|||||||||||| | || || || ||||| ||||| ||||||||| | ||||| || |||
Sbjct: 447 atttaccactttctgggcacctctactttcagtgaatacactgttgttcatgtcggttgt 388
Query: 106 gtggccaaaatcaatcctttggctcctcttgacaaagtctgtgttctaagttgtggaatc 165
|| ||||| ||||| ||| ||||||||||||||||| ||||| || ||||||||||||
Sbjct: 387 gttgccaagatcaaccctgatgctcctcttgacaaagtttgtgtactcagttgtggaatc 328
Query: 166 tccacaggtcttggtgccactcttaatgttgctaagcctccaaaaggttca-actgttgc 224
|| |||||||||||||||||| | || ||||| || || | |||||| ||| |||||||
Sbjct: 327 tctacaggtcttggtgccactttgaacgttgcgaaacc-caaaaagggtcagtctgttgc 269
Query: 225 tatttttggattgggagctgtaggtcttgctgctgctgaaggggctaggattgctggggc 284
|||||||||||||| ||||| || ||||||||||| |||||||| || || |||| ||
Sbjct: 268 aatttttggattgggcgctgttggccttgctgctgcagaaggggcaagaatgtctggagc 209
Query: 285 ttcaagaataattggtgttgatctgaattcaagtagatttgaaga 329
|||||| ||||| ||||| ||| ||||| | ||| ||||||||||
Sbjct: 208 ttcaaggataatcggtgtagatttgaatgccagtcgatttgaaga 164
>KJC_c01705
Length = 1074
Score = 143 bits (72), Expect = 7e-34
Identities = 384/488 (78%)
Strand = Plus / Minus
Query: 115 atcaatcctttggctcctcttgacaaagtctgtgttctaagttgtggaatctccacaggt 174
|||||||| || |||||| | || |||||||| |||| |||||||| ||||| |||||
Sbjct: 700 atcaatcccttagctcctttggataaagtctgcattcttagttgtggtatctcaacagga 641
Query: 175 cttggtgccactcttaatgttgctaagcctccaaaaggttcaactgttgctatttttgga 234
|||||||| || | ||||| ||||| || |||||||| | |||||| |||| |||
Sbjct: 640 cttggtgcgacattgaatgtggctaaaccaaagaaaggttcctcagttgctgttttcgga 581
Query: 235 ttgggagctgtaggtcttgctgctgctgaaggggctaggattgctggggcttcaagaata 294
|| ||||||||||| || || ||||| ||||| || || |||||||| || || || ||
Sbjct: 580 ttaggagctgtaggcctagcagctgcagaaggtgcaagaattgctggagcatctaggatc 521
Query: 295 attggtgttgatctgaattcaagtagatttgaagaagcaaagaaatttggagtaactgag 354
||||| || ||| |||| ||| || ||||||||||| ||||| ||||||||||||||
Sbjct: 520 attggggtggatttgaacccaaagaggtttgaagaagccaagaagtttggagtaactgaa 461
Query: 355 tttgtgaacccaaaacatcacaaaaggccagttcaagaggttattgctgaaatgactgat 414
||||||||||| || |||| | | ||||||||| || | ||||| || ||||| ||
Sbjct: 460 tttgtgaacccgaaggatcatgaccgtccagttcaacagataattgcagagatgacaaat 401
Query: 415 ggaggagccgacagaagtgtggagtgtacaggaaacattgatgcgatgatctctgcattt 474
|| |||| ||||| ||||||||||| ||||| ||||||| || ||| | | || |||
Sbjct: 400 ggtggagtagacaggagtgtggagtgcacagggcacattgacgccatggttgcagctttt 341
Query: 475 gaatgtgtacatgatggttggggtgttgctgttctggttggagtgccacacaaagaagca 534
|||||||| |||||||| ||||| || ||||| || || || || || |||||||||||
Sbjct: 340 gaatgtgttcatgatggatggggggtggctgtgctcgtcggggtaccgaacaaagaagca 281
Query: 535 gttttcaagacccatcccatgaatgtcttgaatgaaagaactctcaaaggtacattcttt 594
||||| | |||| | || || ||| | | |||||||||||||| ||||| || ||||||
Sbjct: 280 gtttttatgaccaagccaatcaatttgcttaatgaaagaactctaaaaggaactttcttt 221
Query: 595 ggaaacta 602
|| |||||
Sbjct: 220 gggaacta 213
>KJC_c12645
Length = 484
Score = 83.8 bits (42), Expect = 6e-16
Identities = 87/102 (85%)
Strand = Plus / Plus
Query: 320 gatttgaagaagcaaagaaatttggagtaactgagtttgtgaacccaaaacatcacaaaa 379
|||||||||| || ||||| ||||| || |||||||||||||| |||||| |||| | |
Sbjct: 383 gatttgaagatgccaagaagtttggtgttactgagtttgtgaatccaaaagatcatgaca 442
Query: 380 ggccagttcaagaggttattgctgaaatgactgatggaggag 421
||| |||||| |||| |||||||||||||||||||| ||||
Sbjct: 443 agcctgttcaacaggtaattgctgaaatgactgatgggggag 484