Jatropha Genome Database
- JcCB0254461.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0254461.20 - phase: 0
(918 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c02434 577 e-164
>KJC_c02434
Length = 1108
Score = 577 bits (291), Expect = e-164
Identities = 640/743 (86%), Gaps = 10/743 (1%)
Strand = Plus / Minus
Query: 165 acctcaccgccggttaacagccttggccaaaa-cttacggacccataatgggtattaaac 223
|||||| ||||||||||||||||||||||||| |||||||||| |||||||| || |||
Sbjct: 1102 acctcatcgccggttaacagccttggccaaaaacttacggacctgtaatgggtgttcaac 1043
Query: 224 taggtcagattcctttccttgtcgtgtcctcgccggaaacagctaaagaagtaatgaaaa 283
| || || |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1042 ttgggcaagttcctttccttgtcgtgtcctcgccggaaacagctaaagaagtaatgaaaa 983
Query: 284 tacaagatcccgttttcgcagaacgagcgcttctccttgcaggagaaatagtgctttata 343
|||||||||||||||| ||||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 982 tacaagatcccgtttttgcagaacgaccgcttgtccttgcaggagaaatagtgctttata 923
Query: 344 accgaaacgacatcatttttgggttgtacggagatcaatggaggcaaatgagaaaaattt 403
||||||| |||||| ||||||||| |||||||||||| |||||||||||||||||| |||
Sbjct: 922 accgaaatgacatcgtttttgggtcgtacggagatcagtggaggcaaatgagaaaatttt 863
Query: 404 gcacgttggaattacttagcgcgaaacgagtacagtcctttcgatcagtgagagaagaag 463
|||||||||||||||||||| | |||||||||||||| || ||| | |||||||||||||
Sbjct: 862 gcacgttggaattacttagcacaaaacgagtacagtcgttccgacccgtgagagaagaag 803
Query: 464 aagtcgcagatttagt-caaatttcttggttcgaaagagggaagtcctgtcaatcttact 522
|||| ||| ||| || ||| || | || | || | |||| |||||| |||||||||
Sbjct: 802 aagttgcatcttttgtaaaaacttatgcgtacaaagaaaggaactcctgttaatcttact 743
Query: 523 catactttattcgctctaacaaattctataactgcaagaaatacggttggtcataaaagc 582
||| ||||||| ||| |||||||||||||| |||||||||| | |||||||||||||||
Sbjct: 742 catgctttatt-gctttaacaaattctatagttgcaagaaatgctgttggtcataaaagc 684
Query: 583 aaaaaccaagaagcatt-gctaagacttattgatgatataattgaatcaacaggaggtgt 641
|||||||||| ||| || | || | |||||||||| ||| ||| |||| | |||||||
Sbjct: 683 aaaaaccaag-agcgttagttagaagttattgatgacatagttgtatcagga-gaggtgt 626
Query: 642 tagtatatctgacatatttccttccttaaaatggcttccttcagtccaaagggaaaggtc 701
||||||| ||| || ||||| ||| || ||||||||||| | | | | |||||||| ||
Sbjct: 625 tagtatagttgatatctttcc-tccctacaatggcttcctactgccaagagggaaagatc 567
Query: 702 tagaattaggaaattgcattatgaaacagatgagatccttgaagatattttacaagagca 761
|||||| |||||||||| | | ||||||||||| || |||||||| |||||||||||
Sbjct: 566 aagaatttggaaattgcaccaaaatacagatgagattctcgaagatatcttacaagagca 507
Query: 762 tagagctaacaggcaggctgcggcttccaggaaaggcgatcggaggggagctgataatct 821
||||||||| || ||||| | ||||||| ||| | ||| |||| | ||||||||||||
Sbjct: 506 tagagctaa-agacaggcgacagcttccaagaattgggataggagcgaagctgataatct 448
Query: 822 tcttgatgttcttttggatcttcaagaaagtggaaatcttgatgttcctttaactgatgt 881
|||||||| |||||||||||||||| | || ||||||||||||| |||||||||||||||
Sbjct: 447 tcttgatg-tcttttggatcttcaacagagcggaaatcttgatg-tcctttaactgatgt 390
Query: 882 cgctatcaaagcagcaatcattg 904
||| |||||||||||||| ||||
Sbjct: 389 cgccatcaaagcagcaattattg 367