Jatropha Genome Database

JcCB0249501.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0249501.20 + phase: 0 /pseudo/partial
         (203 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c05526                                                            202   2e-52

>KJC_c05526 
          Length = 760

 Score =  202 bits (102), Expect = 2e-52
 Identities = 102/102 (100%)
 Strand = Plus / Minus

                                                                       
Query: 3   gatccgattcatacttctgcagaacaggcaaggcaagactcgtctcgccaaatactatgt 62
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 gatccgattcatacttctgcagaacaggcaaggcaagactcgtctcgccaaatactatgt 558

                                                     
Query: 63  tcctctcgaggattccgagaagcataaagtcgaatacgaggt 104
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 tcctctcgaggattccgagaagcataaagtcgaatacgaggt 516