Jatropha Genome Database
- JcCB0244421.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0244421.10 + phase: 0
(678 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c06864 438 e-123
KJC_c10582 90 8e-18
>KJC_c06864
Length = 562
Score = 438 bits (221), Expect = e-123
Identities = 228/229 (99%), Gaps = 1/229 (0%)
Strand = Plus / Minus
Query: 275 ggccatggggaaagtacgccgccgaaataagagattcgaccagaaatggtatcagagttt 334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 ggccatggggaaagtacgccgccgaaataagagattcgaccagaaatggtatcagagttt 187
Query: 335 ggttaggaacttttgatagcgcagaggcggcagctttagcttatgatcaagcagcatttt 394
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 186 ggttaggaacttttgatagcgcagaggcggcagctttagcttatgatcaagcagca-ttt 128
Query: 395 ccatgcgtggttcgatggccatactgaactttccggtggaagtagtaagagaatcgcttc 454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 ccatgcgtggttcgatggccatactgaactttccggtggaagtagtaagagaatcgcttc 68
Query: 455 aagatatcaaataccggtttgaagatgggtgttcgccggttatagcgtt 503
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 aagatatcaaataccggtttgaagatgggtgttcgccggttatagcgtt 19
Score = 357 bits (180), Expect = 2e-98
Identities = 206/211 (97%), Gaps = 4/211 (1%)
Strand = Plus / Minus
Query: 1 atggaaactattttcttcaaccaa-tacctaaaaccagagctctctttcgattcttttga 59
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 518 atggaaactattttcttcaaccaaatacctaaaaccagagctctctttcgattcttttga 459
Query: 60 agaatcattttcttggaacgatcataattcatttgttttcgaatccaactctttctctgt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 agaatcattttcttggaacgatcataattcatttgttttcgaatccaactctttctctgt 399
Query: 120 caatcactccgaaaaaatgattcttttcaacgttcaaccggaaaccaccaataaagaatc 179
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 398 caatcactccgaaaaaatgat--ctttcaacgttcaaccggaaaccaccaataaagaatc 341
Query: 180 gtcggagtcaaattcttcgaccggagccact 210
|||||||||||| ||||||||||||||||||
Sbjct: 340 gtcggagtcaaa-tcttcgaccggagccact 311
>KJC_c10582
Length = 812
Score = 89.7 bits (45), Expect = 8e-18
Identities = 102/121 (84%)
Strand = Plus / Minus
Query: 275 ggccatggggaaagtacgccgccgaaataagagattcgaccagaaatggtatcagagttt 334
||||||||||||| | ||| || || ||||||||||| || || |||| || ||||| |
Sbjct: 243 ggccatggggaaaattcgcggcggagataagagattcaactaggcatggaataagagtat 184
Query: 335 ggttaggaacttttgatagcgcagaggcggcagctttagcttatgatcaagcagcatttt 394
||||||| || ||||||||||||||||| || ||||||||||| |||||||| || ||||
Sbjct: 183 ggttagggacatttgatagcgcagaggcagctgctttagcttacgatcaagctgcttttt 124
Query: 395 c 395
|
Sbjct: 123 c 123