Jatropha Genome Database
- JcCB0236511.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0236511.10 - phase: 0
(1161 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c03287 1968 0.0
KJC_c05268 206 9e-53
KJC_c00544 74 8e-13
>KJC_c03287
Length = 1125
Score = 1968 bits (993), Expect = 0.0
Identities = 1014/1017 (99%), Gaps = 3/1017 (0%)
Strand = Plus / Minus
Query: 147 cgaatatgctgatttggactgggataatcttggatttggtctcttatcaactgatttcat 206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1125 cgaatatgctgatttggactgggataatcttggatttggtctcttatcaactgatttcat 1066
Query: 207 gtatataatgaaatcttctaaagaggggaattttgaacaaggaaaccttagtcgttatga 266
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1065 gtatataatgaaatcttctaaagaggggaattttgaacaaggaaaccttagtcgttatga 1006
Query: 267 aaacattccattgagcccttctgcaggaatcttaaattatggccagggactcttcgaagg 326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1005 aaacattccattgagcccttctgcaggaatcttaaattatggccagggactcttcgaagg 946
Query: 327 aacaaaagcatatagaaaagaaaatggaggccttctcttattccgccccgatctaaatgc 386
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 945 aacaaaagcatatagaaaagaaaatggaggccttctcttattccgccccgatctaaatgc 886
Query: 387 cattcgcatgaatattggagctgagagaatgtgcatgccttctccttcaattgatcaatt 446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 885 cattcgcatgaatattggagctgagagaatgtgcatgccttctccttcaattgatcaatt 826
Query: 447 tgttaatgctgtcaaacaaactgcaattgctaacaagcgttgggttcctcctccaggaaa 506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 825 tgttaatgctgtcaaacaaactgcaattgctaacaagcgttgggttcctcctccaggaaa 766
Query: 507 agggactttgtatattaggccattgcttatggggactggtcccgtactgggtgtagcacc 566
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 765 agggactttgtatattaggccattgcttatggggactggtcccgtactgggtgtagcacc 706
Query: 567 ttcacctgaatacacattcc-ttgtttatgcttcgcccgttggaaactactttaagggag 625
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 705 ttcacctgaatacacattccgttgtttatgcttcgcccgttggaaactactttaagggag 646
Query: 626 gctttgcgcctttgaatttatacgttgacgatgaataccaccgcgcttctcgcggtggag 685
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 gctttgcgcctttgaatttatacgttgacgatgaataccaccgcgcttctcgcggtggag 586
Query: 686 ctggaggcgttaaagcgattagcaactatgctccggttct-gaaagcaattacaagagcg 744
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 585 ctggaggcgttaaagcgattagcaactatgctccggttctagaaagcaattacaagagcg 526
Query: 745 aagaacagagggttttctgatgtactgtatcttgattccgttgaaaagaaatatttagag 804
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 aagaacagagggttttctgatgtactgtatcttgattccgttgaaaagaaatatttagag 466
Query: 805 gaagtctcttcttgtaatattttcatcgtcaagggtaatgttatttcaactcctgcaaca 864
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 gaagtctcttcttgtaatattttcatcgtcaagggtaatgttatttcaactcctgcaaca 406
Query: 865 aatggtactattcttcctggggtcacccgtaaaagcattatagaaattgctcaagatcaa 924
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 aatggtactattcttcctggggtcacccgtaaaagcattatagaaattgctcaagatcaa 346
Query: 925 ggctataaggtcgaagaacgtgttattccggtggatgaactagtgaatgccgatgaagta 984
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 ggctataaggtcgaagaacgtgttattccggtggatgaactagtgaatgccgatgaagta 286
Query: 985 ttttgcacaggaactgctgtagtggttgctcctgttggtagtattacataccaaaataaa 1044
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 ttttgcacaggaactgctgtagtggttgctcctgttggtagtattacataccaaaataaa 226
Query: 1045 agaattgaatacaaaacgggcggcggctctacgtcgcaaaagctgtactcaactcttgta 1104
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 agaattgaatac-aaacgggcggcggctctacgtcgcaaaagctgtactcaactcttgta 167
Query: 1105 ggaatccagacagctgtgattgaagataagaagggttggactgttgagatagaatag 1161
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 ggaatccagacagctgtgattgaagataagaagggttggactgttgagatagaatag 110
>KJC_c05268
Length = 1258
Score = 206 bits (104), Expect = 9e-53
Identities = 576/728 (79%), Gaps = 4/728 (0%)
Strand = Plus / Minus
Query: 151 tatgctgatttggactgggataatcttggatttggtctcttatcaactgatttcatgtat 210
|||||| || |||| ||||||||||||||||||||| | ||||||||| ||||||
Sbjct: 782 tatgctaatatggattgggataatcttggatttggtatgacc-caactgattacatgtac 724
Query: 211 ataatgaaatcttctaaagaggggaattttgaacaaggaaaccttagtcgttatgaaaac 270
|| | |||| ||||||||| || | ||||||| |||| | |||| | |||||| |||
Sbjct: 723 atggtcaaatgttctaaagatggaagttttgaaacaggacaacttactagttatggaaat 664
Query: 271 attccattgagcccttctgcaggaatcttaaattatggccagggactcttcgaaggaaca 330
|| ||| ||||||||||||||| |||| |||||||| ||||| | | ||||| |||
Sbjct: 663 cttgaattaagcccttctgcaggagtcttgaattatggacaggggttgtatgaaggcaca 604
Query: 331 aaagcatatagaaaagaaaatggaggccttctcttattccgccccgatctaaatgccatt 390
|||||||||||||||||| |||| | | || ||||| || || |||| ||||||||||
Sbjct: 603 aaagcatatagaaaagaagatggtcgtttacttttatttcgtccagatcaaaatgccatt 544
Query: 391 cgcatgaatattggagctgagagaatgtgcatgccttctccttcaattgatcaatttgtt 450
|| ||||| || || ||||| ||||||| |||||||| |||||| |||||||||||||||
Sbjct: 543 cgaatgaaaatgggtgctgatagaatgt-catgccttgtccttccattgatcaatttgtt 485
Query: 451 aatgctgtcaaacaaactgcaattgctaacaagcgttgggttcctcctccaggaaaaggg 510
|||| || |||||| ||| | ||||||||||| ||||||||||||||||| |||||
Sbjct: 484 gatgcagttaaacaat-tgctgtggctaacaagcgctgggttcctcctccagggaaagga 426
Query: 511 actttgtatattaggccattgcttatggggactggtcccgtactgggtgtagcaccttca 570
||||| |||||||| || ||||| || || | ||| || | ||||| | |||||| ||
Sbjct: 425 actttatatattagacctttgctaattggaagtggacctattttgggtttggcacctgca 366
Query: 571 cctgaatacacattccttgtttatgcttcgcccgttggaaactactttaagggaggcttt 630
||||||||||||||||| || |||||||| || || || || || || |||| ||||||
Sbjct: 365 cctgaatacacattcctcgtatatgcttctcctgtaggcaattatttcaaggaaggcttg 306
Query: 631 gcgcctttgaatttatacgttgacgatgaataccaccgcgcttctcgcggtggagctgga 690
||||| || || |||| |||| || || | || ||||| ||||| || |||||||||
Sbjct: 305 gcgcccttaaacctatatattgaggaagagtttcatcgcgcctctcgtggaggagctgga 246
Query: 691 ggcgttaaagcgattagcaactatgctccggttctgaaagcaattacaagagcgaagaac 750
|| || || | || | ||| ||||| || |||||||||||||| | ||||| || | |
Sbjct: 245 ggtgtcaagtccatcaccaattatgcgcctgttctgaaagcaatagccagagcaaaaagc 186
Query: 751 agagggttttctgatgtactgtatcttgattccgttgaaaagaaatatttagaggaagtc 810
||| || |||||||||| |||| |||||||| || | |||||||| |||| |||||
Sbjct: 185 aga-ggatttctgatgtgttgtaccttgattcggtgaataagaaatacatagaagaagtt 127
Query: 811 tcttcttgtaatattttcatcgtcaagggtaatgttatttcaactcctgcaacaaatggt 870
||||||||||| ||||| | || ||||| ||||| || || ||||| || |||||||
Sbjct: 126 tcttcttgtaacatttttctagttaagggcaatgtaatatccactccggctgcaaatggg 67
Query: 871 actattct 878
||||||||
Sbjct: 66 actattct 59
>KJC_c00544
Length = 1099
Score = 73.8 bits (37), Expect = 8e-13
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 475 gctaacaagcgttgggttcctcctccaggaaaagggactttgtatattaggccattgctt 534
|||||||| |||||||||||||||||||| ||||| | |||||||| |||||||||||
Sbjct: 185 gctaacaaacgttgggttcctcctccaggtaaaggttccttgtatatcaggccattgctg 244
Query: 535 atggg 539
|||||
Sbjct: 245 atggg 249