Jatropha Genome Database
- JcCB0236181.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0236181.10 - phase: 2 /partial
(748 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c10582 1118 0.0
KJC_c06864 88 4e-17
>KJC_c10582
Length = 812
Score = 1118 bits (564), Expect = 0.0
Identities = 604/614 (98%), Gaps = 4/614 (0%)
Strand = Plus / Minus
Query: 1 gtatacctcaggctcaggctcagtatgcacttctaaaagcataccaaacagtcaaccaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 gtatacctcaggctcaggctcagtatgcacttctaaaagcataccaaacagtcaaccaac 551
Query: 61 taaacattccaaatctcgttaccagattcacatggattcctcaaatttttactctcccaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 taaacattccaaatctcgttaccagattcacatggattcctcaaatttttactctcccaa 491
Query: 121 ttctgatttctcatcggaatcttctttcggatcgccggaatccttctatagcccatcgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 ttctgatttctcatcggaatcttctttcggatcgccggaatccttctatagcccatcgtt 431
Query: 181 taaccaagattctctccctttcaatgaaaatgattccgaagaaatgcttttgtatggact 240
||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 430 taaccaagattctctcc-tttcaatgaaa-tgattccgaagaaatgcttttgtatggact 373
Query: 241 aatttcagaggcaacgcaagaaacgtcaaaaatggattattcgaacnnnnnnntcaaaga 300
|||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 372 aatttcagaggcaacgcaagaaacgtcaaaaatggattattcgaacaaaaaa-tcaa-ga 315
Query: 301 agaggaggtgagttcaataataaaacaaaacacaaagaaggaaagcaaatccttcagagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 agaggaggtgagttcaataataaaacaaaacacaaagaaggaaagcaaatccttcagagg 255
Query: 361 tgtaaggaggcggccatggggaaaattcgcggcggagataagagattcaactaggcatgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 tgtaaggaggcggccatggggaaaattcgcggcggagataagagattcaactaggcatgg 195
Query: 421 aataagagtatggttagggacatttgatagcgcagaggcagctgctttagcttacgatca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 aataagagtatggttagggacatttgatagcgcagaggcagctgctttagcttacgatca 135
Query: 481 agctgctttttcaatgagaggagctggggctgtactgaattttccagttgaaagagtaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 agctgctttttcaatgagaggagctggggctgtactgaattttccagttgaaagagtaaa 75
Query: 541 agagtcacttgaggatatgaaatacagccatgaagaagatggctgctcacctgttgtagc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 agagtcacttgaggatatgaaatacagccatgaagaagatggctgctcacctgttgtagc 15
Query: 601 tcttaaaagaaaac 614
||||||||||||||
Sbjct: 14 tcttaaaagaaaac 1
>KJC_c06864
Length = 562
Score = 87.7 bits (44), Expect = 4e-17
Identities = 95/112 (84%)
Strand = Plus / Minus
Query: 372 ggccatggggaaaattcgcggcggagataagagattcaactaggcatggaataagagtat 431
||||||||||||| | ||| || || ||||||||||| || || |||| || ||||| |
Sbjct: 246 ggccatggggaaagtacgccgccgaaataagagattcgaccagaaatggtatcagagttt 187
Query: 432 ggttagggacatttgatagcgcagaggcagctgctttagcttacgatcaagc 483
||||||| || ||||||||||||||||| || ||||||||||| ||||||||
Sbjct: 186 ggttaggaacttttgatagcgcagaggcggcagctttagcttatgatcaagc 135