Jatropha Genome Database
- JcCB0235361.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0235361.10 - phase: 0 /partial
(1060 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c00944 1715 0.0
>KJC_c00944
Length = 2065
Score = 1715 bits (865), Expect = 0.0
Identities = 898/909 (98%), Gaps = 3/909 (0%)
Strand = Plus / Minus
Query: 152 aaaaacagcctatttcagattctttgaaatcaatcccatcacaagccactttggctgctt 211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2064 aaaaacagcctatttcagattctttgaaatcaatcccatcacaagccactttggctgctt 2005
Query: 212 tgctcttctcttcgctaaccccacaagcgttagccctagacaattctactgtaccgacgc 271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2004 tgctcttctcttcgctaaccccacaagcgttagccctagacaattctactgtaccgacgc 1945
Query: 272 caccgcctgtaatcgaagcccaacccaccaaacccagcgcttccaattcctctcctttct 331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1944 caccgcctgtaatcgaagcccaacccaccaaacccagcgcttccaattcctctcctttct 1885
Query: 332 ctcaaaatcttcttctcacagccccaaaaccccaatcccaatctactactgaccttcctg 391
|||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||||||
Sbjct: 1884 ctcaaa-tcttcttctcacagcccaaaa--cccaatcccaatctactactgaccttcctg 1828
Query: 392 aaggcactcaatggcgatacagcgaattcctcaatgcagtcaagaagggcaaagtcgaga 451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1827 aaggcactcaatggcgatacagcgaattcctcaatgcagtcaagaagggcaaagtcgaga 1768
Query: 452 gagttcgtttcagcaaagatggttctgctctacagctcaccgccgtagacggccgccgtg 511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1767 gagttcgtttcagcaaagatggttctgctctacagctcaccgccgtagacggccgccgtg 1708
Query: 512 ctaccgtcattgttcctaatgaccctgatcttatcgatattttagctatgaacggcgtcg 571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1707 ctaccgtcattgttcctaatgaccctgatcttatcgatattttagctatgaacggcgtcg 1648
Query: 572 atatctccgtatccgaaggagattccggcaatggtcttttcaattttattggaaatcttt 631
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1647 atatctccgtatccgaaggagattccggcaatggtcttttcaattttattggaaatcttt 1588
Query: 632 tattcccattcctcgctttcgctggattgttcctccttttccgccgggcacagggcggtc 691
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1587 tattcccattcctcgctttcgctggattgttcctccttttccgccgggcacagggcggtc 1528
Query: 692 ctggaggacctggcggattaggcgggcccatggattttggaaggtcgaaatcgaaatttc 751
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1527 ctggaggacctggcggattaggcgggcccatggattttggaaggtcgaaatcgaaatttc 1468
Query: 752 aagaagtgccagagactggtgttacatttgctgatgtagcaggagctgaccaagcaaaat 811
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1467 aagaagtgccagagactggtgttacatttgctgatgtagcaggagctgaccaagcaaaat 1408
Query: 812 tggaactccaagaagttgttgatttcttgaagaacccggacaagtacacagctttaggag 871
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1407 tggaactccaagaagttgttgatttcttgaagaacccggacaagtacacagctttaggag 1348
Query: 872 ccaaaattccaaaagggtgtttattagtagggccacctggaacaggtaagactttgttag 931
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1347 ccaaaattccaaaagggtgtttattagtagggccacctggaacaggtaagactttgttag 1288
Query: 932 ctagagcagtagctggagaggcaggagtgccgnnnnnnncatgtgcagcttcagagtttg 991
|||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1287 ctagagcagtagctggagaggcaggagtgccgtttttttcatgtgcagcttcagagtttg 1228
Query: 992 tggagttgtttgtgggagtgggagcatcaagagtcagagatttgtttgagaaagccaaag 1051
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1227 tggagttgtttgtgggagtgggagcatcaagagtcagagatttgtttgagaaagccaaag 1168
Query: 1052 caaaggctc 1060
|||||||||
Sbjct: 1167 caaaggctc 1159