Jatropha Genome Database
- JcCB0231741.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0231741.10 + phase: 0 /partial
(2043 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c05897 977 0.0
KJC_c08020 858 0.0
KJC_c09035 291 3e-78
>KJC_c05897
Length = 524
Score = 977 bits (493), Expect = 0.0
Identities = 521/525 (99%), Gaps = 4/525 (0%)
Strand = Plus / Minus
Query: 1200 gtcaattttcaatcacaggtttatggggatagctgaacaaatgggacggaccctccagag 1259
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 524 gtcaattttcaatcacaggtttatggggatagctgaacaaatgggacggacc-tccagag 466
Query: 1260 aacttccatatcaacaaatatcaaggaaaggctagatttctcctgtgctctttttggtcc 1319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 aacttccatatcaacaaatatcaaggaaaggctagatttctcctgtgctctttttggtcc 406
Query: 1320 tgatggaggactagtt-gctaatgctcccca-tgtccc-tgtgcaccttggagctatgtc 1376
|||||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||
Sbjct: 405 tgatggaggactagtttgctaatgctccccactgtcccctgtgcaccttggagctatgtc 346
Query: 1377 aagtacagttagatggcagctcaattattggggtgacaatttgaaggaaggtgatgtatt 1436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 aagtacagttagatggcagctcaattattggggtgacaatttgaaggaaggtgatgtatt 286
Query: 1437 ggttaccaatcatccttgtgctggaggtagccatcttcctgatattactgtcattacacc 1496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 ggttaccaatcatccttgtgctggaggtagccatcttcctgatattactgtcattacacc 226
Query: 1497 agtttttgacaaggaaaaactggtgttttttgttgcaagtagaggacatcatgcagagat 1556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 agtttttgacaaggaaaaactggtgttttttgttgcaagtagaggacatcatgcagagat 166
Query: 1557 tggaggtattactcctggaagtatgcctccgttttcaaagtccatatgggaagaaggagc 1616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 tggaggtattactcctggaagtatgcctccgttttcaaagtccatatgggaagaaggagc 106
Query: 1617 tgcaatcaaagcatttaagcttgtggaaagtggagtttttcaagaagaaggaatcatcaa 1676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105 tgcaatcaaagcatttaagcttgtggaaagtggagtttttcaagaagaaggaatcatcaa 46
Query: 1677 acttctcaaattcccaggttctgatgaattgacttataaaatccc 1721
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45 acttctcaaattcccaggttctgatgaattgacttataaaatccc 1
>KJC_c08020
Length = 486
Score = 858 bits (433), Expect = 0.0
Identities = 475/481 (98%), Gaps = 6/481 (1%)
Strand = Plus / Minus
Query: 633 ttcctgcagagaagata-tgttagtaaag-caggtaaagcagaagctacaagcacaagga 690
||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 486 ttcctgcagagaagataatgttagtaaagacaggtaaagcagaagctacaagcacaagga 427
Query: 691 tttagaggggaaaacattacaacagagacatatttaaatttaaggtatgaaggtacggat 750
|| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 426 tt-agaggggaaaacattacaacagagacatatt-aaatttaaggtatgaaggtacggat 369
Query: 751 acttctatcatggtaaggagacatgtaaatgaagatggatcagcaggcgactatgctgtg 810
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 acttctatcatggtaaggagacatgtaaatgaagatggatcagcaggcgactatgctgtg 309
Query: 811 gaatttgtcaagttattccagcaggagtatggattcaaactgcaaaacaggaatattatt 870
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gaatttgtcaagttattccagcaggagtatggattcaaactgcaaaacaggaatattatt 249
Query: 871 atctgtgatgtaagagttcgtggtattggcgtcactaatatactaaagccacaagtccta 930
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 atctgtgatgtaagagttcgtggtattggcgtcactaatatactaaagccacaagtccta 189
Query: 931 gaacccactcctagttccccaaaaatggaaggccactacaaggtttacttcaggaatgga 990
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 188 gaacccactcctagttcccc-aaaatggaaggccactacaaggtttacttcaggaatgga 130
Query: 991 tggcatgatgcacctctcttcaagcttgagaatctggggcctggacatattatagttggc 1050
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 tggcatgatgcacctctcttcaagcttgagaatctggggcctggacatattatagttggc 70
Query: 1051 ccttcaatcatcatgaatggcaatagtactgtgatagtagaa-cccaactgcaatgctgt 1109
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 69 ccttcaatcatcatgaatggcaatagtactgtgatagtagaaccccaactgcaatgctgt 10
Query: 1110 t 1110
|
Sbjct: 9 t 9
>KJC_c09035
Length = 662
Score = 291 bits (147), Expect = 3e-78
Identities = 154/155 (99%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 1886 agatgctcaagtcagttgctgcaagagtttcaaatcagccaaccgtgtttcgggagaaca 1945
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 agatgctcaagtcagttgctgcaagagtttcaaatcagccaaccgtgtttcgggagaaca 603
Query: 1946 attctgtgacaatcgaggaagaggaatacatggatgatggctctgtgatacatct-aaaa 2004
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 602 attctgtgacaatcgaggaagaggaatacatggatgatggctctgtgatacatctaaaaa 543
Query: 2005 cttactattgattctgataaaggtgaagcgaattt 2039
|||||||||||||||||||||||||||||||||||
Sbjct: 542 cttactattgattctgataaaggtgaagcgaattt 508