Jatropha Genome Database

JcCB0231591.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0231591.10 + phase: 1 /pseudo/partial
         (476 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c08652                                                             92   1e-18

>KJC_c08652 
          Length = 484

 Score = 91.7 bits (46), Expect = 1e-18
 Identities = 86/98 (87%), Gaps = 1/98 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgagaaagtttgcaatgatcgaaccggtgaaatggttcattctctcatatttatggg-a 59
           |||||||||||||||||| |||||| |||||||||||||  ||||| ||||||||||| |
Sbjct: 387 atgagaaagtttgcaatggtcgaactggtgaaatggttcgctctcttatatttatgggta 446

                                                 
Query: 60  ccaacattctaccagcagttagttcacatggcttaaga 97
           ||||||||||| |||| |||  | ||||||||| ||||
Sbjct: 447 ccaacattctatcagcggttgatccacatggctgaaga 484