Jatropha Genome Database

JcCB0231041.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0231041.10 - phase: 0 /partial
         (606 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c11577                                                            856   0.0  

>KJC_c11577 
          Length = 515

 Score =  856 bits (432), Expect = 0.0
 Identities = 432/432 (100%)
 Strand = Plus / Plus

                                                                       
Query: 175 tcaatgagcagatttggagaccacagggaacttcttaagggacccctttactatgcctta 234
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   tcaatgagcagatttggagaccacagggaacttcttaagggacccctttactatgcctta 60

                                                                       
Query: 235 actattactttaacttgtgcaatctattggaggacttcccctatcacaattgcagcaata 294
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  actattactttaacttgtgcaatctattggaggacttcccctatcacaattgcagcaata 120

                                                                       
Query: 295 tgcaacttgtgtgctggagatggaatggcagacattgtgggaagacggttcggcaatcat 354
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgcaacttgtgtgctggagatggaatggcagacattgtgggaagacggttcggcaatcat 180

                                                                       
Query: 355 aaactcccttacaacacaaataagtctatagctggtagcgttgcaatggcactggctggt 414
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaactcccttacaacacaaataagtctatagctggtagcgttgcaatggcactggctggt 240

                                                                       
Query: 415 tttttagcttccatcacgtatatgcattattttgcctcatttggatacgttcgtgaaagt 474
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tttttagcttccatcacgtatatgcattattttgcctcatttggatacgttcgtgaaagt 300

                                                                       
Query: 475 tgggaaatgacaatgggcttcttggttgtctctattgcatcagccattgtagaatcactt 534
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgggaaatgacaatgggcttcttggttgtctctattgcatcagccattgtagaatcactt 360

                                                                       
Query: 535 cccataagtactcaacttgatgacaatctcactgtaagtttgacttctgtgttgcttgga 594
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cccataagtactcaacttgatgacaatctcactgtaagtttgacttctgtgttgcttgga 420

                       
Query: 595 acccttgttttc 606
           ||||||||||||
Sbjct: 421 acccttgttttc 432