Jatropha Genome Database
- JcCB0226591.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0226591.10 + phase: 1 /partial
(641 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c11400 1168 0.0
>KJC_c11400
Length = 637
Score = 1168 bits (589), Expect = 0.0
Identities = 610/613 (99%), Gaps = 3/613 (0%)
Strand = Plus / Minus
Query: 1 acacagttaggcctgctgatgtagggcttaaagaggaaaatccagatgatgaccgagggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 acacagttaggcctgctgatgtagggcttaaagaggaaaatccagatgatgaccgagggc 551
Query: 61 acggcatttttggactgaaccgattaagtcgggcagctagatgggctcaaccaataacat 120
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 550 acggcatttttggactgaaccgattaa-tcgggcagctagatgggctcaaccaataacat 492
Query: 121 acatagatatttacgagtgtgatagttttacgatgtgtatattctgcttccctacttcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 acatagatatttacgagtgtgatagttttacgatgtgtatattctgcttccctacttcct 432
Query: 181 cagttatcccactccatgaccatcctggcatgactgttttcagcaaaattctttatggct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 cagttatcccactccatgaccatcctggcatgactgttttcagcaaaattctttatggct 372
Query: 241 ctttgcatgtcaaagcctatgattgggttgagcctacctgtatccttgaaggcaaggaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 ctttgcatgtcaaagcctatgattgggttgagcctacctgtatccttgaaggcaaggaat 312
Query: 301 ctggtaatccaccagtaaagttggcaaagttggcagttgataaagttttgacagctccat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 ctggtaatccaccagtaaagttggcaaagttggcagttgataaagttttgacagctccat 252
Query: 361 gtgggacatcaatcttgtacccgaaaagcggggggaatctccattgtttcactgcagtca 420
|||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 251 gtgggacatcaatcttgt-cccgaaaa-cggggggaatctccattgtttcactgcagtca 194
Query: 421 ccccttgtgctgtgcttgacattctcacaccctcttacagggaagacgtaggcaggaaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 ccccttgtgctgtgcttgacattctcacaccctcttacagggaagacgtaggcaggaaat 134
Query: 481 gctcttactaccatgattacccgtattcccccttctcttcaggaaatggaagcgagctag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 gctcttactaccatgattacccgtattcccccttctcttcaggaaatggaagcgagctag 74
Query: 541 gtgatggaaaagaagaggactatgcatggcttgcagagatagaaacaccagataatctgt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 gtgatggaaaagaagaggactatgcatggcttgcagagatagaaacaccagataatctgt 14
Query: 601 atatgcgtccagg 613
|||||||||||||
Sbjct: 13 atatgcgtccagg 1