Jatropha Genome Database

JcCB0226331.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0226331.10 - phase: 0 /partial
         (681 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c05591                                                            948   0.0  

>KJC_c05591 
          Length = 478

 Score =  948 bits (478), Expect = 0.0
 Identities = 478/478 (100%)
 Strand = Plus / Minus

                                                                       
Query: 22  caactgctatctgttgcttgcttgtcattagcagctaaaatggaggaagctctcgttcct 81
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 caactgctatctgttgcttgcttgtcattagcagctaaaatggaggaagctctcgttcct 419

                                                                       
Query: 82  tctcttttggatctccaggttgaaggtgcgaaatatatctttgaaccaagaacaatccgt 141
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 tctcttttggatctccaggttgaaggtgcgaaatatatctttgaaccaagaacaatccgt 359

                                                                       
Query: 142 agaatggaacttctcgttcttagtgtgttggattggaggctacgatctgtaacaccattt 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 agaatggaacttctcgttcttagtgtgttggattggaggctacgatctgtaacaccattt 299

                                                                       
Query: 202 agctttcttgatttctttgcatgcaagctcgattcatcatcaacttacatcgggtttctg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 agctttcttgatttctttgcatgcaagctcgattcatcatcaacttacatcgggtttctg 239

                                                                       
Query: 262 atttcacgggccaaagagatcattttatctaatatgcaagaagcgagctttcttgagtat 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 atttcacgggccaaagagatcattttatctaatatgcaagaagcgagctttcttgagtat 179

                                                                       
Query: 322 tggccatcgagcattgctgctgcagctatactttgtgcagccaatgaaataccaaaattg 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 tggccatcgagcattgctgctgcagctatactttgtgcagccaatgaaataccaaaattg 119

                                                                       
Query: 382 tctcttgttaatcctgagcttgctgaatcatggtgtgatggtctaagcaaagaaaaaatc 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 tctcttgttaatcctgagcttgctgaatcatggtgtgatggtctaagcaaagaaaaaatc 59

                                                                     
Query: 442 atcagctgctaccagttaatgcaagatctcgtgcttgataatagccggagaaaacccc 499
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58  atcagctgctaccagttaatgcaagatctcgtgcttgataatagccggagaaaacccc 1