Jatropha Genome Database
- JcCB0222931.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0222931.10 + phase: 0 /TE/partial
(2357 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c04660 841 0.0
KJC_c08597 531 e-150
KJC_c12872 379 e-104
KJC_c07611 74 2e-12
KJC_s19696 58 1e-07
>KJC_c04660
Length = 606
Score = 841 bits (424), Expect = 0.0
Identities = 567/608 (93%), Gaps = 5/608 (0%)
Strand = Plus / Minus
Query: 1276 ggcctaaaacagagtcctcgagcttggtttggt-agattttg-caatgtggttcaccaat 1333
||||||||||||||||||||||||||||||||| |||||||| ||||||||| || ||||
Sbjct: 606 ggcctaaaacagagtcctcgagcttggtttggttagattttgtcaatgtggtacatcaat 547
Query: 1334 ttggcatgtagaagagtacttctgatcattctgtatttttcagaagtactaagactagtt 1393
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 546 ttggcatgcagaagagtacttctgatcattctgtatttttcagaagtactaagactggtt 487
Query: 1394 tgattctacttgtggtttatgttgatgacattgttattacagggagtgattctgcaggca 1453
|||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct: 486 tgattctacttgtggtttatgttgatgacattgttattacagggagtgattcagccggca 427
Query: 1454 ttgcatcactcaagtcattcctccagactcagttccagacaaaagacttaggattgttga 1513
|| |||||||||||||||| |||||||| || ||||||||||||||||||||||||||||
Sbjct: 426 ttacatcactcaagtcatttctccagacccaattccagacaaaagacttaggattgttga 367
Query: 1514 agtattttttgggtatagaagtatcttggtgtaagagaggcatcttcttatctcaaagga 1573
|||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 366 -gtattttt-gggtattgaagtatctaggtgtaagagaggcatcttcttatctcaaagga 309
Query: 1574 agtatgtccttgaattactaaagtaaactggaaagttgggtgccaagccatgcagtgctc 1633
||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||
Sbjct: 308 agtatgtccttgacttactgaaggaaactggaaagttgggtgccaagccatgcagtgctc 249
Query: 1634 caatgactcctaatttgcaactttcaattggtggtaagctatttgatgatcttgagatgt 1693
|||||||||||||||||||||||||||||| ||||||| |||||||||||| |||||||
Sbjct: 248 caatgactcctaatttgcaactttcaattgatggtaagatatttgatgatcccgagatgt 189
Query: 1694 ataaaagattggtaggcaaattgaattatcttacggtaacaagtccagatattgcttact 1753
||| |||||| || |||||| ||||||||||||| |||||| ||||||||||||||||||
Sbjct: 188 atagaagattagtgggcaaactgaattatcttaccgtaacacgtccagatattgcttact 129
Query: 1754 ctgtgagcgtcttaagccagtttatgtcttctcctactgttattcattgggaagc-ttag 1812
|||||||| |||||||||| ||||||||||||||||||| || |||||||||||| |||
Sbjct: 128 ctgtgagcatcttaagccaatttatgtcttctcctactgatagtcattgggaagctttat 69
Query: 1813 gacaaattttgtgctcgttgaaaggtaatccaggtcgtggcctcctttacagtaatcatg 1872
||||||||||||||| ||||||| ||||||||| |||||||||||||||||||||||
Sbjct: 68 gacaaattttgtgctgcttgaaagttaatccaggctgtggcctcctttacagtaatcata 9
Query: 1873 ggcatttg 1880
||||||||
Sbjct: 8 ggcatttg 1
>KJC_c08597
Length = 545
Score = 531 bits (268), Expect = e-150
Identities = 382/415 (92%), Gaps = 5/415 (1%)
Strand = Plus / Minus
Query: 1946 atattgtgtctttgtgggtggaaacttgatatcgtggaggagcaagaaacaaaatatagt 2005
||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||| ||||
Sbjct: 545 atattgtgt-tttgtaggtggaaacttgatatcatggaggagcaagaaacaaaatgtagt 487
Query: 2006 ctcacgatcgagtgctgaattaaaatatcgag--atggcgcaatctgcttgtgaaataat 2063
||||||||||||| | ||| | ||||||||| ||||| ||||||||||||||| ||||
Sbjct: 486 ctcacgatcgagtaataaatcagaatatcgagcaatggcacaatctgcttgtgaattaat 427
Query: 2064 ttggattcgtcaattgttagaggaaattggcttcaagtcgtccttgcctgcaaagttatg 2123
|||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 426 ttggat-cgtcagttgttagaggaaattggcttcaagtcatccttgcctgcaaagttatg 368
Query: 2124 gtgtgataatcaagttgctcttcacattgcatcaaatccagtattccataaacgaacaaa 2183
|||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 367 gtgtgataatcaagctgctcttcacattgcatcaaatccagtattccatgaacgaacaaa 308
Query: 2184 acatattgagattgattttcatttcattcgtg-aaagatacaacaaggtgttatctctac 2242
|||||| |||||| ||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct: 307 acatatcgagattaattgtcatttcattcgtgaaaagatacaacaaggtgttatctctac 248
Query: 2243 agggcacgttaaaacaagtgaacagttaagagatttctttacaaaagctctaaatggacc 2302
||| |||||||||||||||||||||||| | ||| |||||||||||||| |||| |||||
Sbjct: 247 aggacacgttaaaacaagtgaacagttaggggatatctttacaaaagctttaaacggacc 188
Query: 2303 tcaggttaactatctttgtaacaagttgggcatgattaacatctatgctccaact 2357
| |||| ||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 187 ccgggttgactatctttgtaacaagttaggcatgattaatatctatgctccaact 133
>KJC_c12872
Length = 692
Score = 379 bits (191), Expect = e-104
Identities = 247/263 (93%), Gaps = 2/263 (0%)
Strand = Plus / Plus
Query: 2094 cttcaagtcgtccttgcctgcaaagttatggtgtgataatcaagttgctcttcacattgc 2153
||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 291 cttcaagtcatccttgcctgcaaagttatggtgtgataatcaagctgctcttcacattgc 350
Query: 2154 atcaaatccagtattccataaacgaacaaaacatattgagattgattttcatttcattcg 2213
||||||||||||||||||| |||||||||||||||| |||||||||| ||||||||||||
Sbjct: 351 atcaaatccagtattccatgaacgaacaaaacatatcgagattgattgtcatttcattcg 410
Query: 2214 tg-aaagatacaacaaggtgttatctctacagggcacgttaaaacaagtgaacagttaag 2272
|| ||||||||||||| || |||||||||||||| ||||||||||||||||| ||||| |
Sbjct: 411 tgaaaagatacaacaaagtattatctctacagggtacgttaaaacaagtgaaaagttagg 470
Query: 2273 agatttctttacaaaagctctaaatggacctcaggttaactatctttgtaacaagttggg 2332
|||| ||||||||||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct: 471 agatatctttacaaaagctctaaatggacctcgaattaactatctttgt-acaagttggg 529
Query: 2333 catgattaacatctatgctccaa 2355
|||||||||||||||||||||||
Sbjct: 530 catgattaacatctatgctccaa 552
>KJC_c07611
Length = 674
Score = 73.8 bits (37), Expect = 2e-12
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 2317 tttgtaacaagttgggcatgattaacatctatgctccaact 2357
|||||||||||||| ||||||||||||||||||||||||||
Sbjct: 588 tttgtaacaagttgagcatgattaacatctatgctccaact 628
>KJC_s19696
Length = 456
Score = 58.0 bits (29), Expect = 1e-07
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 2317 tttgtaacaagttgggcatgattaacatctatgctccaact 2357
||||| |||||||| ||||||||||||||| ||||||||||
Sbjct: 45 tttgttacaagttgagcatgattaacatctgtgctccaact 5