Jatropha Genome Database

JcCB0219281.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0219281.10 + phase: 0 /partial
         (441 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c10393                                                            559   e-159

>KJC_c10393 
          Length = 449

 Score =  559 bits (282), Expect = e-159
 Identities = 282/282 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   gaagttcatgactatttgaagactctatgtcccgacttgcatattactcgaggtgaatat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 gaagttcatgactatttgaagactctatgtcccgacttgcatattactcgaggtgaatat 227

                                                                       
Query: 61  gacgaagagatgcgatatccagaaaccaaaactcttactattggtcaattcaaattggga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 gacgaagagatgcgatatccagaaaccaaaactcttactattggtcaattcaaattggga 287

                                                                       
Query: 121 ctgtgtcatgggcatcaggttattccatggggtgatctagactcgctagccatgctccag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 ctgtgtcatgggcatcaggttattccatggggtgatctagactcgctagccatgctccag 347

                                                                       
Query: 181 agacagttggatgtagacatacttgtgacaggtcatacccatcaattcacagcttacaag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 agacagttggatgtagacatacttgtgacaggtcatacccatcaattcacagcttacaag 407

                                                     
Query: 241 catgaaggaggagttgttataaacccaggatctgccacgggt 282
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 catgaaggaggagttgttataaacccaggatctgccacgggt 449