Jatropha Genome Database
- JcCB0217351.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0217351.10 + phase: 0 /partial
(474 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c00426 882 0.0
KJC_s14603 773 0.0
>KJC_c00426
Length = 1266
Score = 882 bits (445), Expect = 0.0
Identities = 474/486 (97%), Gaps = 12/486 (2%)
Strand = Plus / Minus
Query: 1 gtacagtgccttgaagcaggaaaagatcaaatgattaatcatcatcaacagtaccgtaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 gtacagtgccttgaagcaggaaaagatcaaatgattaatcatcatcaacagtaccgtaat 571
Query: 61 tttcaattagggttggagtttgattcctcaaaaccaacttacagctataatggatca--- 117
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 tttcaattagggttggagtttgattcctcaaaaccaacttacagctataatggatcaatc 511
Query: 118 ---------gtctcaatttcttcaatggatgttggagtggtgcaagattcaacaatgagt 168
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 agtcacagtgtctcaatttcttcaatggatgttggagtggtgcaagattcaacaatgagt 451
Query: 169 gaaatctcaatctcacactcaagaactccaaaagggacaattgaccttttctccggtcct 228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 gaaatctcaatctcacactcaagaactccaaaagggacaattgaccttttctccggtcct 391
Query: 229 ccaatgcagatgccatcccaacttagtccgcgggacagggaagcaagggtcctaagatac 288
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 ccaatgcagatgccatcccaacttagtccgcgggacagggaagcaagggtcctaagatac 331
Query: 289 agagagaaaaagaagaccagaaagtttgagaagacaatcaggtatgcgtcaaggaaggca 348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 agagagaaaaagaagaccagaaagtttgagaagacaatcaggtatgcgtcaaggaaggca 271
Query: 349 tacgcagagaccagaccacgaatcaaaggccggtttgcaaagagaacagatgtagatttt 408
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 tacgcagagaccagaccacgaatcaaaggccggtttgcaaagagaacagatgtagatttt 211
Query: 409 gaagtggatcagatgttctccacaacattaatgacagaaactggatatagcattgtccca 468
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 gaagtggatcagatgttctccacaacattaatgacagaaactggatatagcattgtccca 151
Query: 469 tcattt 474
||||||
Sbjct: 150 tcattt 145
>KJC_s14603
Length = 486
Score = 773 bits (390), Expect = 0.0
Identities = 426/439 (97%), Gaps = 13/439 (2%)
Strand = Plus / Minus
Query: 5 agtgccttgaagcaggaaaagatcaaatgattaatcatcatcaacagtaccgtaattttc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 agtgccttgaagcaggaaaagatcaaatgattaatcatcatcaacagtaccgtaattttc 379
Query: 65 aattagggttggagtttgattcctcaaaaccaacttacagctataatggatca------- 117
||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 aattagggttg-agtttgattcctcaaaaccaacttacagctataatggatcaatcagtc 320
Query: 118 -----gtctcaatttcttcaatggatgttggagtggtgcaagattcaacaatgagtgaaa 172
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 acagtgtctcaatttcttcaatggatgttggagtggtgcaagattcaacaatgagtgaaa 260
Query: 173 tctcaatctcacactcaagaactccaaaagggacaattgaccttttctccggtcctccaa 232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 tctcaatctcacactcaagaactccaaaagggacaattgaccttttctccggtcctccaa 200
Query: 233 tgcagatgccatcccaacttagtccgcgggacagggaagcaagggtcctaagatacagag 292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 tgcagatgccatcccaacttagtccgcgggacagggaagcaagggtcctaagatacagag 140
Query: 293 agaaaaagaagaccagaaagtttgagaagacaatcaggtatgcgtcaaggaaggcatacg 352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 agaaaaagaagaccagaaagtttgagaagacaatcaggtatgcgtcaaggaaggcatacg 80
Query: 353 cagagaccagaccacgaatcaaaggccggtttgcaaagagaacagatgtagattttgaag 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 cagagaccagaccacgaatcaaaggccggtttgcaaagagaacagatgtagattttgaag 20
Query: 413 tggatcagatgttctccac 431
|||||||||||||||||||
Sbjct: 19 tggatcagatgttctccac 1