Jatropha Genome Database

JcCB0216831.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0216831.10 + phase: 0 /pseudo/partial
         (747 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c09340                                                            942   0.0  

>KJC_c09340 
          Length = 737

 Score =  942 bits (475), Expect = 0.0
 Identities = 475/475 (100%)
 Strand = Plus / Plus

                                                                       
Query: 231 tttcctcgaacatggggagacatctcagtcattatcactttctgatcttttcattctgaa 290
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   tttcctcgaacatggggagacatctcagtcattatcactttctgatcttttcattctgaa 60

                                                                       
Query: 291 ggatggatctttaacacctgtattaaaggcagcaaacccccctgtccgggctaatgtatt 350
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ggatggatctttaacacctgtattaaaggcagcaaacccccctgtccgggctaatgtatt 120

                                                                       
Query: 351 gtatatgagcccagaatactctgtgcccatctcggagactgtaaaacatatatttcaccc 410
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtatatgagcccagaatactctgtgcccatctcggagactgtaaaacatatatttcaccc 180

                                                                       
Query: 411 atattttgatcaagcaatttggtttcagaactctagtttatatcatttcagcatgtttca 470
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atattttgatcaagcaatttggtttcagaactctagtttatatcatttcagcatgtttca 240

                                                                       
Query: 471 tgcttcacatcatattttacctgttcctgcaactgaagatgaaattgaagctgaagccac 530
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgcttcacatcatattttacctgttcctgcaactgaagatgaaattgaagctgaagccac 300

                                                                       
Query: 531 tgctgtcagagccgttgcagagggcctttgtcccttaaaaattgtcttggatagggttgt 590
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgctgtcagagccgttgcagagggcctttgtcccttaaaaattgtcttggatagggttgt 360

                                                                       
Query: 591 gttgacttcaactggtgtccttctgggatgctggcaggtgatctctggacctgatcccat 650
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gttgacttcaactggtgtccttctgggatgctggcaggtgatctctggacctgatcccat 420

                                                                  
Query: 651 aaccattcgttctaaattgagaactgcacttccacatgccccagagaagcaactt 705
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aaccattcgttctaaattgagaactgcacttccacatgccccagagaagcaactt 475