Jatropha Genome Database

JcCB0216511.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0216511.10 - phase: 0 
         (204 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c00493                                                            359   2e-99

>KJC_c00493 
          Length = 1123

 Score =  359 bits (181), Expect = 2e-99
 Identities = 181/181 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggattggaaagcgtagatacttcatcattcatgtcggatttcctccaaaaatgtggt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51  atgggattggaaagcgtagatacttcatcattcatgtcggatttcctccaaaaatgtggt 110

                                                                       
Query: 61  ggctacgccgtcatcgatggcggctttgccactgaactcgaacgacatggcgctgaccta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 ggctacgccgtcatcgatggcggctttgccactgaactcgaacgacatggcgctgaccta 170

                                                                       
Query: 121 aatgaccctctctggagcgccaagtgccttatcagctctcctcacctcgtcagaaaggta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 aatgaccctctctggagcgccaagtgccttatcagctctcctcacctcgtcagaaaggta 230

            
Query: 181 c 181
           |
Sbjct: 231 c 231