Jatropha Genome Database

JcCB0212851.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0212851.10 - phase: 1 /pseudo
         (713 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c10100                                                            989   0.0  

>KJC_c10100 
          Length = 674

 Score =  989 bits (499), Expect = 0.0
 Identities = 513/515 (99%), Gaps = 2/515 (0%)
 Strand = Plus / Minus

                                                                       
Query: 141 gctgctgcacctgtcttatactgtaaaaatgcgttagacatttctaaaacggcacgagca 200
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 gctgctgcacctgtcttatactgtaaaaatgcgttagacatttctaaaacggcacgagca 615

                                                                       
Query: 201 gtgttaataaatgctggtcaagcaaatgctgcaacaggtgatgcaggttaccaagatgtt 260
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 gtgttaataaatgctggtcaagcaaatgctgcaacaggtgatgcaggttaccaagatgtt 555

                                                                       
Query: 261 ctagaatgtgctgacgcccttgctaaggtacttaatttgaagcaagaggaagtgttgatt 320
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 ctagaatgtgctgacgcccttgctaaggtacttaatttgaagcaagaggaagtgttgatt 495

                                                                       
Query: 321 gaatctactggtgtaattggtcacagaataaaaaaggaagcacttctaaatgcgcttcct 380
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 494 gaatctactggtgtaattggtcacagaataaaaaagg-agcacttctaaatgcgcttcct 436

                                                                       
Query: 381 gaattagtgaattctctcacatcatctcttgaaggggcaggttctgcagcagtggcaatt 440
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 gaattagtgaattctctcacatcatctcttgaaggggcaggttctgcagcagtggcaatt 376

                                                                       
Query: 441 acaactactgaccttgtgagcaagagtgtggcaattgagtcccaagttggagacatgagt 500
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 acaactactgaccttgtgagcaagagtgtggcaattgagtcccaagttggagacatgagt 316

                                                                       
Query: 501 gtaagagttgggggaatggccaaaggttctgggatgatccatccaaacatggccaccatg 560
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 gtaagagtt-ggggaatggccaaaggttctgggatgatccatccaaacatggccaccatg 257

                                                                       
Query: 561 ttgggtgtaataactactgacgcgcttgtcgaagctgatgtttggagaaagatggtgcta 620
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 ttgggtgtaataactactgacgcgcttgtcgaagctgatgtttggagaaagatggtgcta 197

                                              
Query: 621 attgctgttaaccggagtttcaaccaaataacagt 655
           |||||||||||||||||||||||||||||||||||
Sbjct: 196 attgctgttaaccggagtttcaaccaaataacagt 162