Jatropha Genome Database
- JcCB0204821.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0204821.10 - phase: 2 /pseudo/partial
(733 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c10739 712 0.0
KJC_c05572 230 4e-60
>KJC_c10739
Length = 545
Score = 712 bits (359), Expect = 0.0
Identities = 373/375 (99%), Gaps = 2/375 (0%)
Strand = Plus / Plus
Query: 313 tgatgaaaggagtattccaggaaacacagtggctgtccaagcagatatgcca-tttaatg 371
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1 tgatgaaaggagtattccaggaaacacagtggctgtccaagcagatatgccactttaatg 60
Query: 372 gactcacaacttttggaactgcatttttgtcgaaatttgaatgttcgcaaatgcctcatc 431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gactcacaacttttggaactgcatttttgtcgaaatttgaatgttcgcaaatgcctcatc 120
Query: 432 ctttgctggagcatattacatttgtggacacaccaggagttttatcaggagagaaacaac 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctttgctggagcatattacatttgtggacacaccaggagttttatcaggagagaaacaac 180
Query: 492 gaacacagcgagcttatgattttactggtgtgacctcttggtttgcggcgaagtgtgatc 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gaacacagcgagcttatgattttactggtgtgacctcttggtttgcggcgaagtgtgatc 240
Query: 552 tcattctgcttctgtttgatcctcacaaacttgatgttagtgatgagttcaagcgtgtga 611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tcattctgcttctgtttgatcctcacaaacttgatgttagtgatgagttcaagcgtgtga 300
Query: 612 tttcatcattgcgtggtcatgatgataaaattcgtgtggttctcaacaaggcagaccaa- 670
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tttcatcattgcgtggtcatgatgataaaattcgtgtggttctcaacaaggcagaccaag 360
Query: 671 gttgatactcagcaa 685
|||||||||||||||
Sbjct: 361 gttgatactcagcaa 375
>KJC_c05572
Length = 652
Score = 230 bits (116), Expect = 4e-60
Identities = 116/116 (100%)
Strand = Plus / Plus
Query: 13 agatatctctttcctctgttacatctatcattgatggcttgaagagactgtacattcaga 72
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 agatatctctttcctctgttacatctatcattgatggcttgaagagactgtacattcaga 542
Query: 73 agctgaagccattggaagttgcttatcgatttaatgattttgtatctccactattg 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 agctgaagccattggaagttgcttatcgatttaatgattttgtatctccactattg 598
Score = 109 bits (55), Expect = 1e-23
Identities = 55/55 (100%)
Strand = Plus / Plus
Query: 151 gacaagcagtgattttgatgccaaaccgatggttatgctattgggtcaatattcc 205
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 gacaagcagtgattttgatgccaaaccgatggttatgctattgggtcaatattcc 652