Jatropha Genome Database
- JcCB0202231.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0202231.10 + phase: 0
(1536 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c05896 1697 0.0
>KJC_c05896
Length = 907
Score = 1697 bits (856), Expect = 0.0
Identities = 898/909 (98%), Gaps = 4/909 (0%)
Strand = Plus / Plus
Query: 127 cgcaaactcaaattgcctccatcaccaccaaggctaccactgatcggaaaccttcaccag 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cgcaaactcaaattgcctccatcaccaccaaggctaccactgatcggaaaccttcaccag 60
Query: 187 ttaggtccactcccttaccgctctctcaaaaagctttctgataaatatggccctcttatg 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttaggtccactcccttaccgctctctcaaaaagctttctgataaatatggccctcttatg 120
Query: 247 atggtccatttcggaaaagttccgactcttgtagtttcttcggcagagatagctcaagaa 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atggtccatttcggaaaagttccgactcttgtagtttcttcggcagagatagctcaagaa 180
Query: 307 atcactaaaaatcatgatattgctttcggtgaccggcctaaaaccgccgcggccgatgac 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atcactaaaaatcatgatattgctttcggtgaccggcctaaaaccgccgcggccgatgac 240
Query: 367 ctgttctttggatgccagaacctcgctttttgtccatatggtgagtattggagacaagtg 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctgttctttggatgccagaacctcgctttttgtccatatggtgagtattggagacaagtg 300
Query: 427 aagaaggtttgcgttcttgaactcttgagccagaaaagagtacaatattttgaatttgta 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aagaaggtttgcgttcttgaactcttgagccagaaaagagtacaatattttgaatttgta 360
Query: 487 agaagagaagaaactg-caaacttagtggagaaactgcgccatgcaagcttgcaaggatc 545
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 agaagagaagaaactgacaaacttagtggagaaactgcgccatgcaagcttgcaaggatc 420
Query: 546 tccagttgatttaagtgaattgcttgtttcaatttctaacaacatcgtatcaagatcagc 605
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 t-cagttgatttaagtgaattgcttgtttcaatttctaacaacatcgtatcaagatcagc 479
Query: 606 tcttggtactgtatataataatgaaagtgggcatagtagttctggggatttggttagagg 665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 tcttggtactgtatataataatgaaagtgggcatagtagttctggggatttggttagagg 539
Query: 666 agcaatagaccttgttggaagtttcaccttccaagannnnnnnccttctttgggtttgct 725
|||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 540 agcaatagaccttgttggaagtttcaccttccaagatttttttccttctttgggtttgct 599
Query: 726 agatgttctaactggcttcacaggaaaagtg-aaaaaagcttccaaagaattgcatggtt 784
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 600 agatgttctaactggcttcacaggaaaagtgaaaaaaagcttccaaagaattgcatggtt 659
Query: 785 ttcttgataaagtgattgaagaacatctaggaagaagccaggacaaggctgatgatagga 844
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 660 ttcttgataaagtgattgaagaacatctaggaagaagccaggacaaggctgatgat-gga 718
Query: 845 aagacattgtggatattcttctccatcttgaaaagactgacatgcttaccgttgatttca 904
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 aagacattgtggatattcttctccatcttgaaaagactgacatgcttaccgttgatttca 778
Query: 905 ctcgcgaaagcatgaaagctgtcctaatggatatgtttattggaggaactgatactactg 964
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 779 ctcgcgaaagcatgaaagctgtcctaatggatatgtttattggaggaactgatactactg 838
Query: 965 caacaaccatggactggacaatggcagagctaatgaaaaatccaagaataatgaagaaag 1024
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 839 caacaaccatggactggacaatggcagagctaatgaaaaatccaagaataatgaagaaag 898
Query: 1025 cacaagaag 1033
|||||||||
Sbjct: 899 cacaagaag 907