Jatropha Genome Database
- JcCB0201931.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0201931.10 - phase: 0 /partial
(830 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c02081 1090 0.0
>KJC_c02081
Length = 651
Score = 1090 bits (550), Expect = 0.0
Identities = 557/558 (99%), Gaps = 1/558 (0%)
Strand = Plus / Minus
Query: 1 atggcttcttcaatttgcattaacgaaattctcacagatgacgagctgcgctcgattctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 atggcttcttcaatttgcattaacgaaattctcacagatgacgagctgcgctcgattctg 498
Query: 61 tccaagctggaaagcgacaaggataaggagatattcggcttggtatgcaagagatggctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 tccaagctggaaagcgacaaggataaggagatattcggcttggtatgcaagagatggctc 438
Query: 121 cgcttgcaaagcacagaaaggaagaaacttgctgcccgtgctggacctcacatgcttcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 cgcttgcaaagcacagaaaggaagaaacttgctgcccgtgctggacctcacatgcttcag 378
Query: 181 aaaatggctcaaaggttctctcgcttgatcgaattggacctctctcagtccatttccagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 aaaatggctcaaaggttctctcgcttgatcgaattggacctctctcagtccatttccagg 318
Query: 241 tcgttttatcctggggtcactgattctgatctcgctgtcattgctcatggttttaaaggc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 tcgttttatcctggggtcactgattctgatctcgctgtcattgctcatggttttaaaggc 258
Query: 301 ttgaggatcctcagcttgcagtattgtaaaggtattactgatagtggaatgcggtcaatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 ttgaggatcctcagcttgcagtattgtaaaggtattactgatagtggaatgcggtcaatt 198
Query: 361 ggatgtggtctttcttctctacaatccttggatgtatccttttgcagaaagctaactgac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 ggatgtggtctttcttctctacaatccttggatgtatccttttgcagaaagctaactgac 138
Query: 421 aagggattgttggctgttgctgagggttgtaaagatctgcagagtctacatcttgctggc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 aagggattgttggctgttgctgagggttgtaaagatctgcagagtctacatcttgctggc 78
Query: 481 tgcagactcattactgatggcttgttaagagctctttctaacaactgtcataagctacaa 540
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 77 tgcagactcattactgatggcttgttaagagctctttctaac-actgtcataagctacaa 19
Query: 541 gacttaggcctacaagga 558
||||||||||||||||||
Sbjct: 18 gacttaggcctacaagga 1