Jatropha Genome Database
- JcCB0200811.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0200811.20 - phase: 0 /pseudo/partial
(648 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c01992 1104 0.0
>KJC_c01992
Length = 1083
Score = 1104 bits (557), Expect = 0.0
Identities = 564/565 (99%), Gaps = 1/565 (0%)
Strand = Plus / Plus
Query: 58 caggatattcttgatctggcaaagtatgcatctgtacctgtcattaatggcctgactgac 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 caggatattcttgatctggcaaagtatgcatctgtacctgtcattaatggcctgactgac 578
Query: 118 tacaaccatccttgccaaataatggctgatgccctcacaatgattgaacacattggtcag 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 tacaaccatccttgccaaataatggctgatgccctcacaatgattgaacacattggtcag 638
Query: 178 ttggaaggaaccaaggttgtctatgtcggggatgggaataacattgtgcactcttggttg 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 ttggaaggaaccaaggttgtctatgtcggggatgggaataacattgtgcactcttggttg 698
Query: 238 ttgttggcatctgttattcctttccactttgtctgtgcctgccctaaaggttttgaacca 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 ttgttggcatctgttattcctttccactttgtctgtgcctgccctaaaggttttgaacca 758
Query: 298 gatgcaaaaacagttgagaaggcacagctggctggaattagcaagattgagattacgaat 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 759 gatgcaaaaacagttgagaaggcacagctggctggaattagcaagattgagattacgaat 818
Query: 358 gatccaaaggaagctgttgtgggagctgatgtcgtatactcagatgtgtgggcaagcatg 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 819 gatccaaaggaagctgttgtgggagctgatgtcgtatactcagatgtgtgggcaagcatg 878
Query: 418 ggccaaaaagaagaggctgcacaccgccgg-aaagtatttcaaggatttcaggttgatga 476
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 879 ggccaaaaagaagaggctgcacaccgccggaaaagtatttcaaggatttcaggttgatga 938
Query: 477 agatcttatgaaaatagctggtccaaaagcttatttcatgcactgtttaccagcagagag 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 939 agatcttatgaaaatagctggtccaaaagcttatttcatgcactgtttaccagcagagag 998
Query: 537 gggtgtggaggtgacggatggtgtcattgaagctccaaactctattgtcttcccacaagc 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 999 gggtgtggaggtgacggatggtgtcattgaagctccaaactctattgtcttcccacaagc 1058
Query: 597 tgagaatcgcatgcatgcacaaaac 621
|||||||||||||||||||||||||
Sbjct: 1059 tgagaatcgcatgcatgcacaaaac 1083