Jatropha Genome Database
- JcCB0199171.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0199171.10 + phase: 0
(480 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c01228 787 0.0
KJC_c12756 329 4e-90
>KJC_c01228
Length = 980
Score = 787 bits (397), Expect = 0.0
Identities = 397/397 (100%)
Strand = Plus / Plus
Query: 54 tagtgctgagatgctagtaaatttgaatattccatgggtcattctaggccattctgaacg 113
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 tagtgctgagatgctagtaaatttgaatattccatgggtcattctaggccattctgaacg 302
Query: 114 aagagcacttttaaatgagtcaaatgagtttgttgcagataaggttgcttatgcactttc 173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 aagagcacttttaaatgagtcaaatgagtttgttgcagataaggttgcttatgcactttc 362
Query: 174 tcaaggtttgaaagtgattgcttgtattggtgagacacttgagcaaagagaatcaggatc 233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 tcaaggtttgaaagtgattgcttgtattggtgagacacttgagcaaagagaatcaggatc 422
Query: 234 tacagtggctgttgttgctgcacaaacaaaagcaatagcagataaaatatcaaactgggc 293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 tacagtggctgttgttgctgcacaaacaaaagcaatagcagataaaatatcaaactgggc 482
Query: 294 aaatgttgttttggcttatgaaccagtttgggccattggtacaggaaaggttgcaacacc 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 aaatgttgttttggcttatgaaccagtttgggccattggtacaggaaaggttgcaacacc 542
Query: 354 tgctcaggctcaagaggttcattttgaattgagaaaatggcttagtgagaatgttagtgc 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 tgctcaggctcaagaggttcattttgaattgagaaaatggcttagtgagaatgttagtgc 602
Query: 414 tgaagttgcagcatcgacaagaatcatttatggaggt 450
|||||||||||||||||||||||||||||||||||||
Sbjct: 603 tgaagttgcagcatcgacaagaatcatttatggaggt 639
>KJC_c12756
Length = 450
Score = 329 bits (166), Expect = 4e-90
Identities = 173/174 (99%), Gaps = 1/174 (0%)
Strand = Plus / Minus
Query: 9 ttactttgttgttccattatctcaagttgatttgtcttttgtgtgtagtgctgagatgct 68
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 203 ttactttgttgttccattatctcaagttgatttgtcttttgtgt-tagtgctgagatgct 145
Query: 69 agtaaatttgaatattccatgggtcattctaggccattctgaacgaagagcacttttaaa 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 agtaaatttgaatattccatgggtcattctaggccattctgaacgaagagcacttttaaa 85
Query: 129 tgagtcaaatgagtttgttgcagataaggttgcttatgcactttctcaaggttt 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84 tgagtcaaatgagtttgttgcagataaggttgcttatgcactttctcaaggttt 31
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 145 gttgcagataaggttgcttatgcactttc 173
|||||||||||||||||||||||||||||
Sbjct: 1 gttgcagataaggttgcttatgcactttc 29