Jatropha Genome Database

JcCB0198891.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0198891.10 + phase: 0 
         (699 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c01652                                                            932   0.0  

>KJC_c01652 
          Length = 742

 Score =  932 bits (470), Expect = 0.0
 Identities = 470/470 (100%)
 Strand = Plus / Minus

                                                                       
Query: 207 agactaccagatcgatctcaaagaatgtgggcccatggttttggatgctcttatcaagat 266
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 agactaccagatcgatctcaaagaatgtgggcccatggttttggatgctcttatcaagat 683

                                                                       
Query: 267 caagaacgagatcgatccgacgttaacttttcgccgatcgtgtcgcgaaggaatctgtgg 326
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 caagaacgagatcgatccgacgttaacttttcgccgatcgtgtcgcgaaggaatctgtgg 623

                                                                       
Query: 327 ctcttgtgctatgaacatcgacggctgtaatgggctcgcttgcttgaccaagatcccatc 386
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 ctcttgtgctatgaacatcgacggctgtaatgggctcgcttgcttgaccaagatcccatc 563

                                                                       
Query: 387 cggaaattcctcgacgattactcctttgccccacatgtatgttattaaggatttggtcgt 446
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 cggaaattcctcgacgattactcctttgccccacatgtatgttattaaggatttggtcgt 503

                                                                       
Query: 447 ggatatgactaatttctataatcaatataagagtattgagccttggcttaagagaaagaa 506
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 ggatatgactaatttctataatcaatataagagtattgagccttggcttaagagaaagaa 443

                                                                       
Query: 507 cccgcctcaggttcctggcaaagagatattgcagagtaagaaagatagggctaagcttga 566
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 cccgcctcaggttcctggcaaagagatattgcagagtaagaaagatagggctaagcttga 383

                                                                       
Query: 567 tgggatgtatgagtgtatattgtgtgcttgctgcagcacatcctgccctagctattggtg 626
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 tgggatgtatgagtgtatattgtgtgcttgctgcagcacatcctgccctagctattggtg 323

                                                             
Query: 627 gaatcctgagtcttacttgggtccagctgctttgctccatgctaatcggt 676
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 gaatcctgagtcttacttgggtccagctgctttgctccatgctaatcggt 273