Jatropha Genome Database
- JcCB0192111.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0192111.10 + phase: 2 /pseudo/partial
(790 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c02065 414 e-115
>KJC_c02065
Length = 949
Score = 414 bits (209), Expect = e-115
Identities = 579/705 (82%), Gaps = 40/705 (5%)
Strand = Plus / Minus
Query: 28 gggatcaaaggagaggtctgtagtccttaataagaagaagagttg--aggattattgtga 85
|||||||||||||||| |||||||||||||| | ||||||||| |||||||||||||
Sbjct: 929 gggatcaaaggagaggcctgtagtccttaattacaagaagagtctcaaggattattgtga 870
Query: 86 tgggaagacaaaataactgtagtcttcaaggacctgggtccatgagtttcctactgtatc 145
|||||| || |||||||||| || ||||||||||||||| ||||||||| | |
Sbjct: 869 tgggaattcat--taactgtagt-ttaaaggacctgggtccacaagtttcctatcg---c 816
Query: 146 atccttgnnnnnnngggtgtacatgagtcctttcgttctttattccgtcttttacttctt 205
| |||| ||| |||| || ||||||| || |||||| | ||||||||||||||
Sbjct: 815 accctt-tttttctgggagtacttgggtcctttggtcctttatcctgtcttttacttctt 757
Query: 206 tcctgtttaccagtactttggcttcaagggagaacttgtcatcaaaccagttaagacata 265
||||||||||||||||||||||| |||||| |||| || ||| |||||||| |||||||
Sbjct: 756 tcctgtttaccagtactttggctacaagggggaacgcgtgatccaaccagttcagacata 697
Query: 266 tgctt----------------cctctacttcaaatgtatcatggaaacactttttgttct 309
||||| || |||||||||| | |||||||||||| ||||||| |
Sbjct: 696 tgctttattgtattggtgcttccactacttcaaacgcatcatggaaacattttttgtgca 637
Query: 310 gtgatttagccatgcacc---accactgtgtaatgtgttccgaaattgttcttcttactg 366
|||||||||||||| | |||||||| |||||||||||||||||| ||| ||||||
Sbjct: 636 ccgatttagccatgcaacttcaccactgtccaatgtgttccgaaattgtgcttattactg 577
Query: 367 gacatttggttgctacatggcttactatgtaaaccacccactttatgctcctgttagtga 426
||||||||||||||| || ||||||||||| |||||||||||||| |||||||||| ||
Sbjct: 576 gacatttggttgctatattgcttactatgtgaaccacccactttacactcctgttagcga 517
Query: 427 tcttcaatgaaagattgggttttggctttggtttgatttgtcaagttgcaagcttctatt 486
||||||||| |||||||| ||| || ||||||||||||||||||||||||| ||| ||||
Sbjct: 516 tcttcaatggaagattggatttggg-tttggtttgatttgtcaagttgcaaacttttatt 458
Query: 487 gccatatcttgttggnnnnnnnnnnnnnnntctttgcagtccagattggagtggagggta 546
|||| |||||| | |||| ||||||||||| || ||||||||||
Sbjct: 457 gccacatcttgct-----------aaaaaatcttcgcagtccagatgggggtggagggta 409
Query: 547 tcaaatcccacgtgggtttctctttaacatggtgacatgttcaaattacacaacagaggt 606
||||||||||||||| ||||||||| | || ||||| ||| ||||||||||||||||| |
Sbjct: 408 tcaaatcccacgtggatttctctttgatattgtgacctgtgcaaattacacaacagagat 349
Query: 607 ttatcagtggttgggtttcaatattgctatgcagactgttgcaggctacttctttcttgt 666
|||||||||||||||||||||||||| | |||||||||||||||||| ||||||||||
Sbjct: 348 ctatcagtggttgggtttcaatattgcaacacagactgttgcaggctacatctttcttgt 289
Query: 667 ggttgcttctatgatcatgaccaattgggcttttgcaaaccaccg 711
||||||| |||||||||||||||||||||| ||||||| |||||
Sbjct: 288 ggttgctgctatgatcatgaccaattgggcccttgcaaagcaccg 244