Jatropha Genome Database
- JcCB0191441.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0191441.10 + phase: 0
(456 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c01092 904 0.0
KJC_c03099 309 3e-84
KJC_c09722 244 2e-64
>KJC_c01092
Length = 633
Score = 904 bits (456), Expect = 0.0
Identities = 456/456 (100%)
Strand = Plus / Plus
Query: 1 atgggtcgtatgcacagtcgcggtaagggtatttctgcttcggctctgccttacaagagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 59 atgggtcgtatgcacagtcgcggtaagggtatttctgcttcggctctgccttacaagagg 118
Query: 61 actcccccaagctggctcaagatctctgctcaggatgttgaggataacatttgcaaattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 actcccccaagctggctcaagatctctgctcaggatgttgaggataacatttgcaaattt 178
Query: 121 gcgaagaaggggcttactccttctcagattggtgtcattcttcgtgattctcatggtatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 gcgaagaaggggcttactccttctcagattggtgtcattcttcgtgattctcatggtatt 238
Query: 181 gctcaggtgaggagtgtcactggaaacaagattttgcgcatccttaaggctcatggtctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 gctcaggtgaggagtgtcactggaaacaagattttgcgcatccttaaggctcatggtctt 298
Query: 241 gcccctgaaattcctgaggatttgtatcatctcatcaagaaggctgttgcaattaggaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 gcccctgaaattcctgaggatttgtatcatctcatcaagaaggctgttgcaattaggaag 358
Query: 301 catttggagaggaacagaaaagataaggattccaagttcaggttgatccttgtagagagc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 catttggagaggaacagaaaagataaggattccaagttcaggttgatccttgtagagagc 418
Query: 361 cggattcacaggcttgctcgatactacaagaaaacgaagaagctacctcctgtttggaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 cggattcacaggcttgctcgatactacaagaaaacgaagaagctacctcctgtttggaaa 478
Query: 421 tacgagtcaaccactgctagcacacttgtggcctag 456
||||||||||||||||||||||||||||||||||||
Sbjct: 479 tacgagtcaaccactgctagcacacttgtggcctag 514
>KJC_c03099
Length = 730
Score = 309 bits (156), Expect = 3e-84
Identities = 381/452 (84%), Gaps = 3/452 (0%)
Strand = Plus / Minus
Query: 1 atgggtcgtatgcacagtcgcggtaagggtatttctgcttcggctctgccttacaagagg 60
|||||||| ||||||||||| |||||||||||||| ||| | ||| ||||||| ||||||
Sbjct: 704 atgggtcgcatgcacagtcgaggtaagggtatttcagctcccgctttgccttataagagg 645
Query: 61 actcccccaagctggctcaagatctctgctcaggatgttgaggataacatttgcaaattt 120
|| || || || ||||| ||||| |||||||||||||| ||||||||||| |||||||||
Sbjct: 644 acaccgcccagttggctgaagatatctgctcaggatgtcgaggataacatctgcaaattt 585
Query: 121 gcgaagaaggggcttactccttctcagattggtgtcattcttcgtgattctcatggtatt 180
|| ||||| || | ||||| ||||| ||||||||||| |||||||||||||||||||||
Sbjct: 584 gcaaagaaaggcttgactccatctcaaattggtgtcatccttcgtgattctcatggtatt 525
Query: 181 gctcaggtgaggagtgtcactggaaacaagattttgcgcatccttaaggctcatggtctt 240
|| || ||||||||||| ||||| |||||||||||||| || | ||||| ||||| |||
Sbjct: 524 gcccaagtgaggagtgttactggtaacaagattttgcggatattgaaggcacatgggctt 465
Query: 241 gcccctgaaattcctgaggatttgtatcatctcatcaagaaggctgttgcaattaggaag 300
|| |||| ||| ||||| |||||||| || ||||||||||| || ||||| ||||||||
Sbjct: 464 gctcctg-aatacctgaagatttgtaccacctcatcaagaa-gcagttgccattaggaaa 407
Query: 301 catttggagaggaacagaaaagataaggattccaagttcaggttgatccttgtagagagc 360
||||||||||||||||| || ||||| |||||||| || | |||||| | || ||||||
Sbjct: 406 catttggagaggaacaggaaggataaagattccaaattta-gttgattttggttgagagc 348
Query: 361 cggattcacaggcttgctcgatactacaagaaaacgaagaagctacctcctgtttggaaa 420
|||| ||| | || ||||| || |||||||| || |||||||| || || || ||||||
Sbjct: 347 aggatccaccgcctagctcgctattacaagaagacaaagaagcttccaccagtatggaaa 288
Query: 421 tacgagtcaaccactgctagcacacttgtggc 452
|| || ||||| ||||| ||||| ||||||||
Sbjct: 287 tatgaatcaactactgccagcacccttgtggc 256
>KJC_c09722
Length = 607
Score = 244 bits (123), Expect = 2e-64
Identities = 296/351 (84%), Gaps = 2/351 (0%)
Strand = Plus / Plus
Query: 82 atctctgctcaggatgttgaggataacatttgcaaatttgcgaagaaggggcttactcct 141
||||| ||||| ||||||||||| || || ||||| ||||| |||||||| || || |||
Sbjct: 126 atctccgctcaagatgttgaggaaaatatctgcaagtttgcaaagaagggcctgacgcct 185
Query: 142 tctcagattggtgtcattcttcgtgattctcatggtattgctcaggtgaggagtgtcact 201
|||||||| || |||||||| ||||| ||||| |||||||||||||| ||||| || |||
Sbjct: 186 tctcagatcggcgtcattctccgtgactctcacggtattgctcaggtcaggagcgtaact 245
Query: 202 ggaaacaagattttgcgcatccttaaggctcatggtcttgcccctgaaattcctgaggat 261
|| |||||||| | || || ||||| |||||||| | || || || ||||| || |||
Sbjct: 246 ggcaacaagatcctccgtattcttaaagctcatgggttggctccggagattccagaagat 305
Query: 262 ttgtatcatctcatcaagaaggctgttgcaattaggaagcatttggagaggaacagaaaa 321
||||| ||| | ||||||||||| ||||| ||| | |||||||||||||||||||| ||
Sbjct: 306 ttgtaccatttgatcaagaaggcagttgcgattcgcaagcatttggagaggaacaggaag 365
Query: 322 gataaggattccaagttcaggttgatccttgtagagagccggattcacaggcttgctcga 381
|||||||||||||||||||||||||| | || || || |||| |||||||| |||||
Sbjct: 366 gataaggattccaagttcaggttgat-ttggtggaaagtaggatccacaggctcgctcgc 424
Query: 382 tactacaagaaaacgaagaagctacctcctg-tttggaaatacgagtcaac 431
|||||||||||||| |||||||| ||||||| |||||||||||||||||||
Sbjct: 425 tactacaagaaaaccaagaagctccctcctgttttggaaatacgagtcaac 475