Jatropha Genome Database
- JcCB0190821.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0190821.10 - phase: 0 /pseudo
(708 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c08420 876 0.0
KJC_c01737 571 e-163
>KJC_c08420
Length = 584
Score = 876 bits (442), Expect = 0.0
Identities = 463/466 (99%), Gaps = 3/466 (0%)
Strand = Plus / Plus
Query: 1 atggcttctgcggctctaatctgcgatacccacccatggaagaccttgaaggcccatgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 atggcttctgcggctctaatctgcgatacccacccatggaagaccttgaaggcccatgtg 179
Query: 61 gaagacattaagaagactcatttacgcgatttgatgagcgacagtgagcgatgcaagtcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 gaagacattaagaagactcatttacgcgatttgatgagcgacagtgagcgatgcaagtcc 239
Query: 121 atggttgtcgagtttgatggaattatagtagacttctcacggcaacaagccaccgttgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 atggttgtcgagtttgatggaattatagtagacttctcacggcaacaagccaccgttgac 299
Query: 181 acagtggataagctctataacttagcagaggcagcccatctcaaggaaaagattcatcac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 acagtggataagctctataacttagcagaggcagcccatctcaaggaaaagattcatcac 359
Query: 241 atgtttaacggggagcgtattaacaccacagagaataggtcagtgcttcatgtagctctc 300
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 atgtttaac-gggagcgtattaacaccacagagaataggtcagtgcttcatgtagctctc 418
Query: 301 cgtgcaccaagggatgcagttataaagagtgatggcaaaaatgttgtaccagatgtttgg 360
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 419 cgtgcaccaagggatgcagttataaagagtgatggc-aaaatgttgtaccagatgtttgg 477
Query: 361 aatgttcttgacaagatcaaagatttttctgaaagactccgcaatggttcctgggttgga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 aatgttcttgacaagatcaaagatttttctgaaagactccgcaatggttcctgggttgga 537
Query: 421 gccacagggaaacagctgactgatgttattgccattggtattggtg 466
||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 538 gccacagggaaacagctgactgatgttattg-cattggtattggtg 582
>KJC_c01737
Length = 805
Score = 571 bits (288), Expect = e-163
Identities = 295/296 (99%), Gaps = 1/296 (0%)
Strand = Plus / Plus
Query: 413 gggttggagccacagggaaacagctgactgatgttattgccattggtattggtggcagct 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gggttggagccacagggaaacagctgactgatgttattgccattggtattggtggcagct 60
Query: 473 tcttaggccctctttttgtgcacactgctcttcaaacagatccagaggctagcaaatttg 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcttaggccctctttttgtgcacactgctcttcaaacagatccagaggctagcaaatttg 120
Query: 533 caaaaggccgccagctgcggtttcttgcaaatgttgatccaatcgatgtcgcaagaaata 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 caaaaggccgccagctgcggtttcttgcaaatgttgatccaatcgatgtcgcaagaaata 180
Query: 593 ttgcaggcctacatcctgaaaccacccttgttgttgtggttttctaaaacttttactact 652
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 181 ttgcaggcctacatcctgaaaccacccttgttgttgtgg-tttctaaaacttttactact 239
Query: 653 gctgaaactatgctgaatgcacgaacactaagggcatggatttcaaaagaacttgg 708
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 gctgaaactatgctgaatgcacgaacactaagggcatggatttcaaaagaacttgg 295