Jatropha Genome Database

JcCB0189041.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0189041.20 - phase: 2 /partial
         (589 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c03023                                                            733   0.0  

>KJC_c03023 
          Length = 705

 Score =  733 bits (370), Expect = 0.0
 Identities = 370/370 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   aatgctctcaaatagagagtcagctagacggtcaagaagaagaaagcaggcccatttgac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 aatgctctcaaatagagagtcagctagacggtcaagaagaagaaagcaggcccatttgac 395

                                                                       
Query: 61  tgagcttgagacgcaggttgcccaattgagagttgaaaattcttctctgctgaaacgcct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 tgagcttgagacgcaggttgcccaattgagagttgaaaattcttctctgctgaaacgcct 455

                                                                       
Query: 121 ctccgacatcagcaataagtacaatgatgcttctgtggataacagagttttaaaagctga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 ctccgacatcagcaataagtacaatgatgcttctgtggataacagagttttaaaagctga 515

                                                                       
Query: 181 cgttgaaacattaagagctaaggtgaagatggctgaggagactgtcaaaaggataactgg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 cgttgaaacattaagagctaaggtgaagatggctgaggagactgtcaaaaggataactgg 575

                                                                       
Query: 241 gttgaatcctttgtcccattctatgcctgagatatccacaatcagcatgccatcatttga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 gttgaatcctttgtcccattctatgcctgagatatccacaatcagcatgccatcatttga 635

                                                                       
Query: 301 tggaagcccttctgacactttgacagatgctgctgttcctattcaagatgaaccgaaacg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 tggaagcccttctgacactttgacagatgctgctgttcctattcaagatgaaccgaaacg 695

                     
Query: 361 cttgtatcag 370
           ||||||||||
Sbjct: 696 cttgtatcag 705